RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 KRBOX1C9JBD0 128 aa12.98□□□□□ -0.33
PTPRU-206ENST00000465525 HIST1H1EP10412 219 aaKnown RBP12.98□□□□□ -0.33
PTPRU-206ENST00000465525 TFPI2P48307 235 aa12.98□□□□□ -0.33
PTPRU-206ENST00000465525 IGFL4Q6B9Z1 124 aa12.98□□□□□ -0.33
PTPRU-206ENST00000465525 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
PTPRU-206ENST00000465525 CCDC28AQ8IWP9 274 aa12.98□□□□□ -0.33
PTPRU-206ENST00000465525 RNF24Q9Y225 148 aa12.98□□□□□ -0.33
PTPRU-206ENST00000465525 YTHDF2Q9Y5A9 579 aaKnown RBP12.98□□□□□ -0.33
PTPRU-206ENST00000465525 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
PTPRU-206ENST00000465525 CD300EQ496F6 205 aaPredicted RBP12.97□□□□□ -0.33
PTPRU-206ENST00000465525 PRR31Q5SQ13 230 aa12.97□□□□□ -0.33
PTPRU-206ENST00000465525 FAM90A2PQ658T7 463 aa12.97□□□□□ -0.33
PTPRU-206ENST00000465525 WFDC3Q8IUB2 231 aa12.97□□□□□ -0.33
PTPRU-206ENST00000465525 MCRIP2Q9BUT9 160 aaKnown RBP12.97□□□□□ -0.33
PTPRU-206ENST00000465525 TMEM167BQ9NRX6 74 aa12.97□□□□□ -0.33
PTPRU-206ENST00000465525 TRBV19A0A075B6N1 114 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 IZUMO1RA6ND01 250 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 HELTA6NFD8 242 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 PAGE4O60829 102 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 NDUFB4O95168 129 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 PSMB3P49720 205 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
PTPRU-206ENST00000465525 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
PTPRU-206ENST00000465525 SUN5Q8TC36 379 aa12.96□□□□□ -0.34
PTPRU-206ENST00000465525 RARRES2Q99969 163 aa12.96□□□□□ -0.34
PTPRU-206ENST00000465525 A0A087X0K7 114 aa12.95□□□□□ -0.34
PTPRU-206ENST00000465525 RAB19A4D1S5 217 aa12.95□□□□□ -0.34
PTPRU-206ENST00000465525 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
PTPRU-206ENST00000465525 CST9LP1Q5W188 147 aa12.95□□□□□ -0.34
PTPRU-206ENST00000465525 UQCC3Q6UW78 93 aa12.95□□□□□ -0.34
PTPRU-206ENST00000465525 EXOC3-AS1Q8N2X6 119 aa12.95□□□□□ -0.34
PTPRU-206ENST00000465525 MS4A6AQ9H2W1 248 aa12.95□□□□□ -0.34
PTPRU-206ENST00000465525 ATP5G3P48201 142 aa12.94□□□□□ -0.34
PTPRU-206ENST00000465525 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
PTPRU-206ENST00000465525 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
PTPRU-206ENST00000465525 NRN1Q9NPD7 142 aa12.94□□□□□ -0.34
PTPRU-206ENST00000465525 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
PTPRU-206ENST00000465525 FAM74A7A6NL05 159 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 IGLL1P15814 213 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 INSL3P51460 131 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 SRSF3P84103 164 aaKnown RBP12.93□□□□□ -0.34
PTPRU-206ENST00000465525 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 Q9H3A6 140 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 DNHD1Q96M86 4753 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 GGTLC3B5MD39 225 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
PTPRU-206ENST00000465525 BCL2P10415 239 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 FAM24BQ8N5W8 94 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 RXFP4Q8TDU9 374 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 C16orf92Q96LL3 132 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 EIF5A2Q9GZV4 153 aaKnown RBP12.93□□□□□ -0.34
PTPRU-206ENST00000465525 MANBALQ9NQG1 85 aa12.93□□□□□ -0.34
PTPRU-206ENST00000465525 TRAV8-2A0A0B4J237 113 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 LOC102723971A0A1B0GUV8 181 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 IFNA1P01562 189 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 IGLV1-51P01701 117 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 ICAM4Q14773 271 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 GUCA2BQ16661 112 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 GUK1Q16774 197 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 DCANP1Q8TF63 244 aa12.92□□□□□ -0.34
PTPRU-206ENST00000465525 ZNF331Q9NQX6 463 aaPredicted RBP12.92□□□□□ -0.34
PTPRU-206ENST00000465525 PGPA6NDG6 321 aa12.91□□□□□ -0.34
PTPRU-206ENST00000465525 SOCS3O14543 225 aa12.91□□□□□ -0.34
PTPRU-206ENST00000465525 PPT1P50897 306 aa12.91□□□□□ -0.34
PTPRU-206ENST00000465525 SUMO1P63165 101 aaKnown RBP12.91□□□□□ -0.34
PTPRU-206ENST00000465525 C20orf173Q96LM9 149 aa12.91□□□□□ -0.34
PTPRU-206ENST00000465525 GPR61Q9BZJ8 451 aa12.91□□□□□ -0.34
PTPRU-206ENST00000465525 RPH3ALQ9UNE2 315 aa12.91□□□□□ -0.34
PTPRU-206ENST00000465525 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
PTPRU-206ENST00000465525 M0R3E3 92 aa12.9□□□□□ -0.34
PTPRU-206ENST00000465525 TSPAN4O14817 238 aa12.9□□□□□ -0.34
PTPRU-206ENST00000465525 GNG5P63218 68 aa12.9□□□□□ -0.34
PTPRU-206ENST00000465525 PDE6HQ13956 83 aa12.9□□□□□ -0.34
PTPRU-206ENST00000465525 LINC00052Q96N35 136 aa12.9□□□□□ -0.34
PTPRU-206ENST00000465525 A0A1W2PRE2 83 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF705FA8MVS1 300 aaPredicted RBP12.89□□□□□ -0.35
PTPRU-206ENST00000465525 K7EQG2 157 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF688P0C7X2 276 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF506Q5JVG8 444 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 VAX2Q9UIW0 290 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 SORL1Q92673 2214 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 SLC25A5P05141 298 aaKnown RBP12.89□□□□□ -0.35
PTPRU-206ENST00000465525 CD5P06127 495 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 MEOX2P50222 304 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 DEFB1P60022 68 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 PAFAH1B2P68402 229 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 PSG9Q00887 426 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 PMS2P11Q13670 270 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 OTORQ9NRC9 128 aa12.89□□□□□ -0.35
PTPRU-206ENST00000465525 C9JQL5 133 aa12.88□□□□□ -0.35
PTPRU-206ENST00000465525 WIPF1O43516 503 aa12.88□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF253O75346 499 aa12.88□□□□□ -0.35
PTPRU-206ENST00000465525 CD81P60033 236 aa12.88□□□□□ -0.35
PTPRU-206ENST00000465525 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
PTPRU-206ENST00000465525 OR2K2Q8NGT1 345 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms