RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 HIST3H2BBQ8N257 126 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 C12orf57Q99622 126 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 IGHV3-49A0A0A0MS15 119 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 SMIM27A0A1W2PRY6 76 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 ZNF785A8K8V0 405 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 BMPR1BO00238 502 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 ZNF207O43670 478 aaKnown RBP9.9□□□□□ -0.82
VAPB-203ENST00000463370 PRNTQ86SH4 94 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 CIARTQ8N365 385 aaPredicted RBP9.9□□□□□ -0.82
VAPB-203ENST00000463370 MBD6Q96DN6 1003 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 BTF3L4Q96K17 158 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 Q96MF0 132 aa9.9□□□□□ -0.82
VAPB-203ENST00000463370 BEX4Q9NWD9 120 aaPredicted RBP9.9□□□□□ -0.82
VAPB-203ENST00000463370 CREBBPQ92793 2442 aa9.9□□□□□ -0.83
VAPB-203ENST00000463370 TRBV7-1A0A0A6YYK4 115 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 A0A1B0GUS0 222 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 IER3P46695 156 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 FAM231DQ6ZW35 169 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 HELZ2Q9BYK8 2649 aaKnown RBP9.89□□□□□ -0.83
VAPB-203ENST00000463370 SCGB2A1O75556 95 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 HLA-DMBP28068 263 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 MEOX2P50222 304 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 TPPP2P59282 170 aa9.89□□□□□ -0.83
VAPB-203ENST00000463370 XKRY2A2RUG3 117 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 DIRC3C9JPN6 131 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 BUB3O43684 328 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 GATCO43716 136 aaKnown RBP9.88□□□□□ -0.83
VAPB-203ENST00000463370 RPL7P18124 248 aaKnown RBP9.88□□□□□ -0.83
VAPB-203ENST00000463370 MRPL54Q6P161 138 aaKnown RBP9.88□□□□□ -0.83
VAPB-203ENST00000463370 LYPD1Q8N2G4 141 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 PITPNC1Q9UKF7 332 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 RNF24Q9Y225 148 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 CUBNO60494 3623 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 TRAV9-1A0A075B6T8 112 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 FAM223BA6NKX1 122 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 J3QLI3 93 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 IGHV3-11P01762 117 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 IGHG4P01861 327 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 PLA2G2AP14555 144 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 PDE6HQ13956 83 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 S100A7AQ86SG5 101 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 FAM223AQ8IWN6 122 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 DOPEY2Q9Y3R5 2298 aa9.88□□□□□ -0.83
VAPB-203ENST00000463370 M0QZK8 103 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 FSHBP01225 129 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 LRRC75A-AS1Q8N1F1 130 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 C19orf71A6NCJ1 209 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 S100A9P06702 114 aaKnown RBP9.87□□□□□ -0.83
VAPB-203ENST00000463370 TMEM183AQ8IXX5 376 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 GRAMD2BQ96HH9 432 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 NEU1Q99519 415 aa9.87□□□□□ -0.83
VAPB-203ENST00000463370 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
VAPB-203ENST00000463370 IGKV2-40A0A087WW87 121 aaPredicted RBP9.86□□□□□ -0.83
VAPB-203ENST00000463370 ZNF705FA8MVS1 300 aaPredicted RBP9.86□□□□□ -0.83
VAPB-203ENST00000463370 IGKV2D-40P01614 121 aaPredicted RBP9.86□□□□□ -0.83
VAPB-203ENST00000463370 S100A8P05109 93 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 PF4V1P10720 104 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 CFHR3Q02985 330 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 PSG3Q16557 428 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 PRR31Q5SQ13 230 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 UNQ9165/PRO28630Q6UXU0 137 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 TMEM75Q8N9X5 138 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 NUP35Q8NFH5 326 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 PRSS22Q9GZN4 317 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 GAR1Q9NY12 217 aaKnown RBP9.86□□□□□ -0.83
VAPB-203ENST00000463370 PSG8Q9UQ74 426 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 AKAP9Q99996 3911 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 ITPR3Q14573 2671 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 GRIFINA4D1Z8 144 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 FABP4P15090 132 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 TCF24Q7RTU0 167 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 AAMDCQ9H7C9 122 aa9.86□□□□□ -0.83
VAPB-203ENST00000463370 CR1P17927 2039 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 ARL3P36405 182 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 COA6Q5JTJ3 125 aaKnown RBP9.85□□□□□ -0.83
VAPB-203ENST00000463370 TMEM136Q6ZRR5 245 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 WFDC11Q8NEX6 87 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 TSKUQ8WUA8 353 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 GTSF1Q8WW33 167 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 PSMG3-AS1Q96PY0 264 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 HIST1H2BLQ99880 126 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 CCDC168Q8NDH2 2452 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 PDZD2O15018 2839 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 IZUMO1RA6ND01 250 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 CRIP1P50238 77 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 RELQ04864 619 aaPredicted RBP9.85□□□□□ -0.83
VAPB-203ENST00000463370 GDF5OSQ5U4N7 250 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 RNF182Q8N6D2 247 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 OR10D4PQ8NGN7 298 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 C8orf49Q96NF6 230 aa9.85□□□□□ -0.83
VAPB-203ENST00000463370 RPP21Q9H633 154 aaKnown RBP9.85□□□□□ -0.83
VAPB-203ENST00000463370 ZNF331Q9NQX6 463 aaPredicted RBP9.85□□□□□ -0.83
VAPB-203ENST00000463370 TRBV6-1A0A0K0K1D8 114 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms