RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PCDH15Q96QU1 1955 aa1.95□□□□□ -2.1
VRK2-208ENST00000463222 DNAH12Q6ZR08 3092 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 XIRP2A4UGR9 3374 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 A0A087X0T9 212 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 IGKV1-9A0A0C4DH69 117 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 HTR1AP08908 422 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 METTL15P1P0C7V9 234 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 IFI30P13284 250 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 SPI1P17947 270 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 GPX2P18283 190 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 FKBP2P26885 142 aaKnown RBP1.94□□□□□ -2.1
VRK2-208ENST00000463222 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 GNG3P63215 75 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 GNG5P63218 68 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 OR8D4Q8NGM9 314 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 FAM172AQ8WUF8 416 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 ADAT3Q96EY9 351 aaPredicted RBP1.94□□□□□ -2.1
VRK2-208ENST00000463222 GINS3Q9BRX5 216 aa1.94□□□□□ -2.1
VRK2-208ENST00000463222 ANAPC1Q9H1A4 1944 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 TRPM7Q96QT4 1865 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 DOCK4Q8N1I0 1966 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 CST8O60676 142 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 IFNA7P01567 189 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 UBBP0CG47 229 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 DEFB115Q30KQ5 88 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 Q6ZQT0 140 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 EXOC3-AS1Q8N2X6 119 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 OR4E2Q8NGC2 313 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 PRNDQ9UKY0 176 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 DDX60LQ5H9U9 1706 aaKnown RBP1.93□□□□□ -2.1
VRK2-208ENST00000463222 SPEF2Q9C093 1822 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 TRIOBPQ9H2D6 2365 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 MICAL3Q7RTP6 2002 aa1.93□□□□□ -2.1
VRK2-208ENST00000463222 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 FN1P02751 2386 aaKnown RBP1.92□□□□□ -2.1
VRK2-208ENST00000463222 FABP1P07148 127 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 OR4E1P0C645 316 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 FKBP1CQ5VVH2 108 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 TRIQKQ629K1 86 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 Q6ZRN7 208 aaPredicted RBP1.92□□□□□ -2.1
VRK2-208ENST00000463222 COA5Q86WW8 74 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 STAG3L4Q8TBR4 150 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 AQP3Q92482 292 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 ZNF625Q96I27 306 aaPredicted RBP1.92□□□□□ -2.1
VRK2-208ENST00000463222 HIST1H2BLQ99880 126 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 SELENOSQ9BQE4 189 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 TRABDQ9H4I3 376 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 CHD7Q9P2D1 2997 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 LHFPL6Q9Y693 200 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 HEATR5BQ9P2D3 2071 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 CHD9Q3L8U1 2897 aa1.92□□□□□ -2.1
VRK2-208ENST00000463222 COL11A1P12107 1806 aaPredicted RBP1.91□□□□□ -2.1
VRK2-208ENST00000463222 PDE4DIPQ5VU43 2346 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 RBBP6Q7Z6E9 1792 aaKnown RBP1.91□□□□□ -2.1
VRK2-208ENST00000463222 A0A0D9SG52 128 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 TMEM212A6NML5 194 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 NDUFC2O95298 119 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 TCL1BO95988 128 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 CRPP02741 224 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 CTSDP07339 412 aaPredicted RBP1.91□□□□□ -2.1
VRK2-208ENST00000463222 RPSAP08865 295 aaKnown RBP1.91□□□□□ -2.1
VRK2-208ENST00000463222 PHBP35232 272 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 CRYBA4P53673 196 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 ELOBQ15370 118 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 SNCBQ16143 134 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 MBD3L1Q8WWY6 194 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 RNF122Q9H9V4 155 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 UFC1Q9Y3C8 167 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 CEP290O15078 2479 aa1.91□□□□□ -2.1
VRK2-208ENST00000463222 TRAV1-1A0A0B4J248 108 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 MFSD11O43934 449 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 COX6A1P12074 109 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 SRP14P37108 136 aaKnown RBP1.9□□□□□ -2.11
VRK2-208ENST00000463222 RRN3P1Q2M238 152 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 AKR1C8PQ5T2L2 129 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 DEFB128Q7Z7B8 93 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 SERPINI1Q99574 410 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 YIPF3Q9GZM5 350 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 TMEM133Q9H2Q1 129 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 LOC285556D6RIA3 1793 aa1.9□□□□□ -2.11
VRK2-208ENST00000463222 REV3LO60673 3130 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 A0A0G2JMZ2 1700 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 SCN8AQ9UQD0 1980 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 TRAV3A0A0B4J244 114 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 H7C1C5 153 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 TAX1BP3O14907 124 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 GPX1P07203 203 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 RNASE4P34096 147 aaKnown RBP1.89□□□□□ -2.11
VRK2-208ENST00000463222 LCN6P62502 163 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 EIF5AP63241 154 aaKnown RBP1.89□□□□□ -2.11
VRK2-208ENST00000463222 TSNQ15631 228 aaKnown RBP1.89□□□□□ -2.11
VRK2-208ENST00000463222 Q1T7F1 81 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 C3orf33Q6P1S2 294 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 ZNF826PQ6ZT77 177 aa1.89□□□□□ -2.11
VRK2-208ENST00000463222 OR10J5Q8NHC4 309 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms