RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
SND1-203ENST00000463020 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
SND1-203ENST00000463020 OR10P1Q8NGE3 313 aa11.31□□□□□ -0.6
SND1-203ENST00000463020 TMEM147Q9BVK8 224 aa11.31□□□□□ -0.6
SND1-203ENST00000463020 VSIRQ9H7M9 311 aa11.31□□□□□ -0.6
SND1-203ENST00000463020 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
SND1-203ENST00000463020 TIMM9Q9Y5J7 89 aa11.31□□□□□ -0.6
SND1-203ENST00000463020 APOBP04114 4563 aaKnown RBP11.3□□□□□ -0.6
SND1-203ENST00000463020 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
SND1-203ENST00000463020 CYB5BO43169 146 aa11.3□□□□□ -0.6
SND1-203ENST00000463020 MT-CO2P00403 227 aa11.3□□□□□ -0.6
SND1-203ENST00000463020 SPCS3P61009 180 aa11.3□□□□□ -0.6
SND1-203ENST00000463020 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
SND1-203ENST00000463020 OR1P1Q8NH06 330 aa11.3□□□□□ -0.6
SND1-203ENST00000463020 WDR61Q9GZS3 305 aaKnown RBP11.3□□□□□ -0.6
SND1-203ENST00000463020 SLC35B3Q9H1N7 401 aa11.3□□□□□ -0.6
SND1-203ENST00000463020 TMEM14BQ9NUH8 114 aa11.3□□□□□ -0.6
SND1-203ENST00000463020 TRAV10A0A0B4J240 114 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 RBFOX3A6NFN3 312 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 FAM74A7A6NL05 159 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 IFNA17P01571 189 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 CMC4P56277 68 aaPredicted RBP11.29□□□□□ -0.6
SND1-203ENST00000463020 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 CSNK1G2-AS1Q8NCQ2 148 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 CLRN3Q8NCR9 226 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 SFT2D1Q8WV19 159 aa11.29□□□□□ -0.6
SND1-203ENST00000463020 IFNA1P01562 189 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 MBP02144 154 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 MFAP4P55083 255 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 ARL16Q0P5N6 197 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 AARDQ4LEZ3 155 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 TMEM41BQ5BJD5 291 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 SPINK9Q5DT21 86 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 ZNF709Q8N972 641 aa11.28□□□□□ -0.6
SND1-203ENST00000463020 MRPL36Q9P0J6 103 aaKnown RBP11.28□□□□□ -0.6
SND1-203ENST00000463020 HERC1Q15751 4861 aa11.27□□□□□ -0.6
SND1-203ENST00000463020 UBE2L5PA0A1B0GUS4 154 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 A0A1B0GV50 99 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 LOC105371267A0A1B0GV96 52 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 C9JQL5 133 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 AMBPP02760 352 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 NPBWR1P48145 328 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 ZNF506Q5JVG8 444 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 PVRIGQ6DKI7 326 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 STHQ8IWL8 128 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 SMCO4Q9NRQ5 59 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 RABAC1Q9UI14 185 aa11.27□□□□□ -0.61
SND1-203ENST00000463020 PUS1Q9Y606 427 aaKnown RBP eCLIP11.27□□□□□ -0.61
SND1-203ENST00000463020 K7EQG2 157 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 MIFP14174 115 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 RAB11AP62491 216 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
SND1-203ENST00000463020 SOHLH1Q5JUK2 328 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 RSG1Q9BU20 258 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 ENY2Q9NPA8 101 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
SND1-203ENST00000463020 PRNDQ9UKY0 176 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
SND1-203ENST00000463020 DEFB131BA0A096LNP1 70 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 M0R036 132 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 GNG7O60262 68 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 ZNF688P0C7X2 276 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 FGF7P21781 194 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 KHDC3LQ587J8 217 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 TXN2Q99757 166 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 GGACTQ9BVM4 153 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 RPRMQ9NS64 109 aa11.25□□□□□ -0.61
SND1-203ENST00000463020 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 IFNA10P01566 189 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
SND1-203ENST00000463020 CCL20P78556 96 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 PRCDQ00LT1 54 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 RHEBQ15382 184 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 VWC2Q2TAL6 325 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 STXBP6Q8NFX7 210 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 DCANP1Q8TF63 244 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 SLC39A9Q9NUM3 307 aa11.24□□□□□ -0.61
SND1-203ENST00000463020 LOC102723971A0A1B0GUV8 181 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 PMS2P5A8MQ11 134 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 MPDU1O75352 247 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
SND1-203ENST00000463020 MLANAQ16655 118 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 TMEM88Q6PEY1 159 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 Q6ZR54 194 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 CBLN2Q8IUK8 224 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 OR10G4Q8NGN3 311 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 ACTR3CQ9C0K3 210 aaPredicted RBP11.23□□□□□ -0.61
SND1-203ENST00000463020 RPS10P5Q9NQ39 176 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 KCNIP2Q9NS61 270 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms