RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 CCDC88CQ9P219 2028 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 MYO9BQ13459 2157 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 A2MP01023 1474 aa1.62□□□□□ -2.15
GPNMB-205ENST00000463011 KIAA2026Q5HYC2 2103 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 TRBV6-8A0A0A6YYG3 113 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 TRAV10A0A0B4J240 114 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 TRBV7-6A0A0J9YX20 115 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 hDV103S1A0JD37 113 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 M0QZK8 103 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 RNASE3P12724 160 aaKnown RBP1.61□□□□□ -2.15
GPNMB-205ENST00000463011 CMPK1P30085 196 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 GTF2A1P52655 376 aaPredicted RBP1.61□□□□□ -2.15
GPNMB-205ENST00000463011 PSG9Q00887 426 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 SMCO1Q147U7 214 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 C1orf137Q5JT78 98 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 TMEM14EPQ6UXP3 125 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 LRRC18Q8N456 261 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 HYLS1Q96M11 299 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 MCEEQ96PE7 176 aa1.61□□□□□ -2.15
GPNMB-205ENST00000463011 TCOF1Q13428 1488 aaKnown RBP1.61□□□□□ -2.15
GPNMB-205ENST00000463011 MPDZO75970 2070 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 TRBV27A0A0K0K1C4 114 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 TMEM189A5PLL7 270 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 CCDC160A6NGH7 325 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 C5orf58C9J3I9 102 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 E7EUB6 86 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 H3BMG7 143 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 LYRM1O43325 122 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 DPM2O94777 84 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 DSCR4P56555 118 aaPredicted RBP1.6□□□□□ -2.15
GPNMB-205ENST00000463011 OR51A4Q8NGJ6 313 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 OR4C6Q8NH72 309 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 DIRC1Q969H9 104 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 TAS2R7Q9NYW3 318 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 CHCHD2Q9Y6H1 151 aaPredicted RBP1.6□□□□□ -2.15
GPNMB-205ENST00000463011 COL4A5P29400 1685 aa1.6□□□□□ -2.15
GPNMB-205ENST00000463011 BORCS7-ASMTA0A0B4J1R7 106 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 A0A1B0GW64 132 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 C9JAW5 83 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 C5orf67F2Z3F1 127 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 HYPMO75409 117 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 ERC2-IT1O76042 136 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 TNFSF15O95150 251 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 FABP4P15090 132 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 CRYGSP22914 178 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 Q5XG85 94 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 TEX261Q6UWH6 196 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 C2orf82Q6UX34 121 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 ARPINQ7Z6K5 226 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 ZNF563Q8TA94 476 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 Q8TAT8 98 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 TP53RKQ96S44 253 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 TMEM138Q9NPI0 162 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 SPANXCQ9NY87 97 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 HIGD1AQ9Y241 93 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 TPRKBQ9Y3C4 175 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 SOX21Q9Y651 276 aaPredicted RBP1.59□□□□□ -2.15
GPNMB-205ENST00000463011 U3KQ87 197 aa1.59□□□□□ -2.15
GPNMB-205ENST00000463011 DLC1Q96QB1 1528 aa1.59□□□□□ -2.16
GPNMB-205ENST00000463011 ZFHX2Q9C0A1 2572 aaPredicted RBP1.58□□□□□ -2.16
GPNMB-205ENST00000463011 NUMA1Q14980 2115 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 COL5A3P25940 1745 aaPredicted RBP1.58□□□□□ -2.16
GPNMB-205ENST00000463011 MT-ND4LP03901 98 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 DBIP07108 87 aaKnown RBP1.58□□□□□ -2.16
GPNMB-205ENST00000463011 SRP9P49458 86 aaKnown RBP1.58□□□□□ -2.16
GPNMB-205ENST00000463011 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 CKS1BP61024 79 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 MAXP61244 160 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 S100A12P80511 92 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 MRPS36P82909 103 aaKnown RBP1.58□□□□□ -2.16
GPNMB-205ENST00000463011 SARNPP82979 210 aaKnown RBP1.58□□□□□ -2.16
GPNMB-205ENST00000463011 TCTE3Q8IZS6 198 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 MORN4Q8NDC4 146 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 BORCS5Q969J3 196 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 OR4C12Q96R67 309 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 NAA38Q9BRA0 125 aaKnown RBP1.58□□□□□ -2.16
GPNMB-205ENST00000463011 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
GPNMB-205ENST00000463011 FAM135BQ49AJ0 1406 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 TNS3Q68CZ2 1445 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 KIAA1107Q9UPP5 1409 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 A0A087WSZ3 146 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 TRAV27A0A087WT01 109 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 C9orf170A2RU37 121 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 ZNF736B4DX44 427 aaPredicted RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 OR2H2O95918 312 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 PAEPP09466 180 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 TPT1P13693 172 aaKnown RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 RPL22P35268 128 aaKnown RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 ZNF93P35789 620 aaPredicted RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 FOXA3P55318 350 aaPredicted RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 CIRBPQ14011 172 aaKnown RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 ZNF833PQ6ZTB9 187 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 KRTAP5-5Q701N2 237 aaPredicted RBP1.57□□□□□ -2.16
GPNMB-205ENST00000463011 OR5A2Q8NGI9 324 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 CLEC2BQ92478 149 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 AP1S3Q96PC3 154 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 FKBP11Q9NYL4 201 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 DSPPQ9NZW4 1301 aa1.57□□□□□ -2.16
GPNMB-205ENST00000463011 GBF1Q92538 1859 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms