RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 AADACL3Q5VUY0 350 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 OR5C1Q8NGR4 320 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 GPER1Q99527 375 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 TEX15Q9BXT5 2789 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 TMEM235A6NFC5 223 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 I3L521 148 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 MED6O75586 246 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 S100A2P29034 98 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 SERPINB10P48595 397 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 HBA1P69905 142 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 TMEM86AQ8N2M4 240 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 UTP20O75691 2785 aaKnown RBP1.6□□□□□ -2.15
SMC4-203ENST00000462668 LRBAP50851 2863 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 MUC21A0A0G2JKD1 596 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 A0A0J9YW62 118 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 MUC21A0A140T8X8 626 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 MDFIC2A0A1B0GVS7 189 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 M0QZK8 103 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 SCTP09683 121 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 ZNF141Q15928 474 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 PATE2Q6UY27 113 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 LRRC28Q86X40 367 aaPredicted RBP1.6□□□□□ -2.15
SMC4-203ENST00000462668 OR9Q1Q8NGQ5 310 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 SPANXCQ9NY87 97 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 SACSQ9NZJ4 4579 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 IGHV3-7P01780 117 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 PSPHP78330 225 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 OR4D11Q8NGI4 311 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 MGLLQ99685 303 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 MICAL3Q7RTP6 2002 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 FAT2Q9NYQ8 4349 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 TRDV1A0A1B0GX56 115 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 G3V2T6 193 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 GNRH2O43555 120 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 CD200P41217 278 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 AMMECR1LQ6DCA0 310 aa1.59□□□□□ -2.15
SMC4-203ENST00000462668 EDC4Q6P2E9 1401 aaKnown RBP1.59□□□□□ -2.15
SMC4-203ENST00000462668 TP53BP1Q12888 1972 aaPredicted RBP1.59□□□□□ -2.16
SMC4-203ENST00000462668 TRAV5A0A0B4J249 113 aa1.59□□□□□ -2.16
SMC4-203ENST00000462668 ZNF860A6NHJ4 632 aa1.59□□□□□ -2.16
SMC4-203ENST00000462668 ODF3BA8MYP8 253 aa1.59□□□□□ -2.16
SMC4-203ENST00000462668 RAB13P51153 203 aa1.59□□□□□ -2.16
SMC4-203ENST00000462668 DNLZQ5SXM8 178 aa1.59□□□□□ -2.16
SMC4-203ENST00000462668 HSPB9Q9BQS6 159 aa1.59□□□□□ -2.16
SMC4-203ENST00000462668 EFCAB11Q9BUY7 163 aa1.59□□□□□ -2.16
SMC4-203ENST00000462668 A0A1W2PNM2 257 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 DUXBA0A1W2PPF3 345 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 IRGMA1A4Y4 181 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 E7EQ34 232 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 COX6A1P12074 109 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 CASP1P29466 404 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 CANT1Q8WVQ1 401 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 TTTY13Q9BZ97 58 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 SPTBN4Q9H254 2564 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 PRRC2CQ9Y520 2896 aaKnown RBP1.58□□□□□ -2.16
SMC4-203ENST00000462668 FAT3Q8TDW7 4589 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 TRBV7-6A0A0J9YX20 115 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 TLCD2A6NGC4 264 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 K7EP13 123 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 HMGB3O15347 200 aaKnown RBP1.58□□□□□ -2.16
SMC4-203ENST00000462668 AKR1C1Q04828 323 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 FAM24BQ8N5W8 94 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 LAMTOR3Q9UHA4 124 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 MED31Q9Y3C7 131 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 MEGF8Q7Z7M0 2845 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 MAST4O15021 2626 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 A0A1W2PNU3 283 aaPredicted RBP1.58□□□□□ -2.16
SMC4-203ENST00000462668 OVOL1O14753 267 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 FKBP2P26885 142 aaKnown RBP1.58□□□□□ -2.16
SMC4-203ENST00000462668 DEFA1P59665 94 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 OR4E2Q8NGC2 313 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 CAPZA3Q96KX2 299 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 PCDH15Q96QU1 1955 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 VPS37CA5D8V6 355 aaPredicted RBP1.58□□□□□ -2.16
SMC4-203ENST00000462668 FABP5P3A8MUU1 101 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 MSMBP08118 114 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 S100A7P31151 101 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 PSMD8P48556 350 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 KLF3P57682 345 aaPredicted RBP1.58□□□□□ -2.16
SMC4-203ENST00000462668 OR4C6Q8NH72 309 aa1.58□□□□□ -2.16
SMC4-203ENST00000462668 RBPMSQ93062 196 aaKnown RBP1.58□□□□□ -2.16
SMC4-203ENST00000462668 A0A1W2PQD3 144 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 CA5AP35218 305 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 AP1S1P61966 158 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 PLCXD2Q0VAA5 305 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 SPANXN3Q5MJ09 141 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 MSRB3Q8IXL7 192 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 WFDC5Q8TCV5 224 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 AIF1LQ9BQI0 150 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 Q9BRP9 147 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 FAM96AQ9H5X1 160 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 MYH11P35749 1972 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 RIIAD1A6NNX1 92 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 FAM107AO95990 144 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 PACRGLQ8N7B6 248 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 ASF1BQ9NVP2 202 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 ABCA7Q8IZY2 2146 aa1.57□□□□□ -2.16
SMC4-203ENST00000462668 MYLKQ15746 1914 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms