RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 A0A087X0K7 114 aa7.45□□□□□ -1.22
CBX3-205ENST00000462165 EREGO14944 169 aa7.45□□□□□ -1.22
CBX3-205ENST00000462165 RPL7P18124 248 aaKnown RBP7.45□□□□□ -1.22
CBX3-205ENST00000462165 ERVFC1-1P60608 527 aa7.45□□□□□ -1.22
CBX3-205ENST00000462165 SRPXP78539 464 aa7.45□□□□□ -1.22
CBX3-205ENST00000462165 PSG3Q16557 428 aa7.45□□□□□ -1.22
CBX3-205ENST00000462165 CLVS1Q8IUQ0 354 aaPredicted RBP7.45□□□□□ -1.22
CBX3-205ENST00000462165 SCGB3A2Q96PL1 93 aa7.45□□□□□ -1.22
CBX3-205ENST00000462165 MIXL1Q9H2W2 232 aa7.45□□□□□ -1.22
CBX3-205ENST00000462165 PAIP2BQ9ULR5 123 aaKnown RBP7.45□□□□□ -1.22
CBX3-205ENST00000462165 A0A096LPF7 62 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 PIGBOS1A0A0B4J2F0 54 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 DUXBA0A1W2PPF3 345 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 GAGE12BA1L429 117 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 CTDSPLO15194 276 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 GAGE7O76087 117 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 RLN2P04090 185 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 GAGE12GP0CL81 117 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 GAGE12IP0CL82 117 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 ANXA3P12429 323 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 FUSP35637 526 aaKnown RBP eCLIP7.44□□□□□ -1.22
CBX3-205ENST00000462165 RPP30P78346 268 aaKnown RBP7.44□□□□□ -1.22
CBX3-205ENST00000462165 CCDC28AQ8IWP9 274 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 CIB3Q96Q77 187 aaPredicted RBP7.44□□□□□ -1.22
CBX3-205ENST00000462165 SHANK2-AS3Q9BTD1 123 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 SCP2D1Q9UJQ7 156 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 HIGD1AQ9Y241 93 aa7.44□□□□□ -1.22
CBX3-205ENST00000462165 FLG2Q5D862 2391 aaPredicted RBP7.44□□□□□ -1.22
CBX3-205ENST00000462165 ANKRD20A5PA0PJZ0 165 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 SIVA1O15304 175 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 MED6O75586 246 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 SLC25A6P12236 298 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 PLP1P60201 277 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 RAP2BP61225 183 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 AKR1C1Q04828 323 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 KIR3DS1Q14943 382 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 CTF1Q16619 201 aa7.43□□□□□ -1.22
CBX3-205ENST00000462165 RPUSD4Q96CM3 377 aaKnown RBP7.43□□□□□ -1.22
CBX3-205ENST00000462165 WRBO00258 174 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 MRPS12O15235 138 aaKnown RBP7.42□□□□□ -1.22
CBX3-205ENST00000462165 RGS5O15539 181 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 SYNGR2O43760 224 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 CYP2G1PQ6ZSU1 146 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 ACOT7LQ6ZUV0 252 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 LRRC20Q8TCA0 184 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 VSIG2Q96IQ7 327 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 NAA50Q9GZZ1 169 aaKnown RBP7.42□□□□□ -1.22
CBX3-205ENST00000462165 TMPRSS5Q9H3S3 457 aa7.42□□□□□ -1.22
CBX3-205ENST00000462165 CTDSP2O14595 271 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 HYPMO75409 117 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 IFNA5P01569 189 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 IL5P05113 134 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 PRB4P10163 310 aaPredicted RBP7.41□□□□□ -1.22
CBX3-205ENST00000462165 CXCL2P19875 107 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 DAZ2Q13117 558 aaKnown RBP7.41□□□□□ -1.22
CBX3-205ENST00000462165 ICAM4Q14773 271 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 GFI1BQ5VTD9 330 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 S100A7AQ86SG5 101 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 LRTM2Q8N967 370 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 C18orf15Q96N68 181 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 PARD6GQ9BYG4 376 aaPredicted RBP7.41□□□□□ -1.22
CBX3-205ENST00000462165 RABL2AQ9UBK7 228 aaPredicted RBP7.41□□□□□ -1.22
CBX3-205ENST00000462165 RABL2BQ9UNT1 228 aa7.41□□□□□ -1.22
CBX3-205ENST00000462165 HMCN2Q8NDA2 5059 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 A0A087WTM6 91 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 SMR3BP02814 79 aaPredicted RBP7.4□□□□□ -1.22
CBX3-205ENST00000462165 OR5G3P0C626 314 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 LINC00869P0C866 280 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 SELENOTP62341 195 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 IL18Q14116 193 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 SPANXN5Q5MJ07 72 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 LCN15Q6UWW0 184 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 Q6ZTI0 123 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 NFE4Q86UQ8 179 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 SLC50A1Q9BRV3 221 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 ZNF331Q9NQX6 463 aaPredicted RBP7.4□□□□□ -1.22
CBX3-205ENST00000462165 MCUBQ9NWR8 336 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 MDFICQ9P1T7 246 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 RNF24Q9Y225 148 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 STRAPQ9Y3F4 350 aaKnown RBP7.4□□□□□ -1.22
CBX3-205ENST00000462165 TNFRSF18Q9Y5U5 241 aa7.4□□□□□ -1.22
CBX3-205ENST00000462165 SMCO3A2RU48 225 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 PMS2P5A8MQ11 134 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
CBX3-205ENST00000462165 H3BP45 60 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 NXPH4O95158 308 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 DNAH10OSP0CZ25 163 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 TMEM128Q5BJH2 165 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 PATE2Q6UY27 113 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 TMED4Q7Z7H5 227 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 CCDC190Q86UF4 302 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 PYGO2Q9BRQ0 406 aa7.39□□□□□ -1.23
CBX3-205ENST00000462165 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 TRGV2A0A075B6R0 118 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 ANXA7P20073 488 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms