RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SIGLEC9Q9Y336 463 aa9.82□□□□□ -0.84
COL4A6-204ENST00000461897 F11RQ9Y624 299 aaKnown RBP9.82□□□□□ -0.84
COL4A6-204ENST00000461897 M0R2Z0 102 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 HNRNPA3P51991 378 aaKnown RBP9.81□□□□□ -0.84
COL4A6-204ENST00000461897 FBLN7Q53RD9 439 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 ASPHD1Q5U4P2 390 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 LINC00322Q6ZN03 302 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-204ENST00000461897 Q6ZN92 141 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 TXN2Q99757 166 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 SRSF8Q9BRL6 282 aaKnown RBP9.81□□□□□ -0.84
COL4A6-204ENST00000461897 Q9H3A6 140 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 ZFHX3Q15911 3703 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 TEX22C9J3V5 150 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 P01737 135 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 NPSP0C0P6 89 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 TSPOP30536 169 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 FOXA3P55318 350 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-204ENST00000461897 FAM120AOSQ5T036 256 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 RBPMS2Q6ZRY4 209 aaKnown RBP9.81□□□□□ -0.84
COL4A6-204ENST00000461897 BLNKQ8WV28 456 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 RNF5Q99942 180 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 WNT10AQ9GZT5 417 aa9.81□□□□□ -0.84
COL4A6-204ENST00000461897 NBPF19A0A087WUL8 3843 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 IGLC1P0CG04 106 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 KRTAP10-9P60411 292 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 MINOS1Q5TGZ0 78 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 AJUBAQ96IF1 538 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 NDFIP1Q9BT67 221 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 SSBP4Q9BWG4 385 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-204ENST00000461897 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 MINOS1-NBL1R4GNA1 71 aa9.8□□□□□ -0.84
COL4A6-204ENST00000461897 ANKRD17O75179 2603 aaKnown RBP9.79□□□□□ -0.84
COL4A6-204ENST00000461897 CD24P25063 80 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 CAMPP49913 170 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 UBE2E1P51965 193 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 LCN12Q6JVE5 192 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
COL4A6-204ENST00000461897 TCF24Q7RTU0 167 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 Q86TA4 180 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 PPP1R27Q86WC6 154 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 STPG4Q8N801 248 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 GATD1Q8NB37 220 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 FBXL15Q9H469 300 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 PTPN13Q12923 2485 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 I3L2K1 104 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 HAX1O00165 279 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 NDUFB8O95169 186 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 IGLV2-11P01706 119 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 APOHP02749 345 aaPredicted RBP9.79□□□□□ -0.84
COL4A6-204ENST00000461897 PLA2G2AP14555 144 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 PAX8Q06710 450 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 BATFQ16520 125 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 ORAOV1Q8WV07 137 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 TMEM70Q9BUB7 260 aa9.79□□□□□ -0.84
COL4A6-204ENST00000461897 POLQO75417 2590 aa9.78□□□□□ -0.84
COL4A6-204ENST00000461897 OOSP1A8MZH6 123 aa9.78□□□□□ -0.84
COL4A6-204ENST00000461897 CCDC144NLQ6NUI1 221 aa9.78□□□□□ -0.84
COL4A6-204ENST00000461897 OR2D3Q8NGH3 330 aa9.78□□□□□ -0.84
COL4A6-204ENST00000461897 SLC25A39Q9BZJ4 359 aaPredicted RBP9.78□□□□□ -0.84
COL4A6-204ENST00000461897 RNF24Q9Y225 148 aa9.78□□□□□ -0.84
COL4A6-204ENST00000461897 LOC102724200A0A096LPH7 203 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-204ENST00000461897 OR5AL1P0C617 328 aa9.77□□□□□ -0.85
COL4A6-204ENST00000461897 PSG1P11464 419 aa9.77□□□□□ -0.85
COL4A6-204ENST00000461897 IGLL1P15814 213 aa9.77□□□□□ -0.85
COL4A6-204ENST00000461897 SAA4P35542 130 aa9.77□□□□□ -0.85
COL4A6-204ENST00000461897 DSCR9P59020 149 aa9.77□□□□□ -0.85
COL4A6-204ENST00000461897 OR4F17Q8NGA8 305 aa9.77□□□□□ -0.85
COL4A6-204ENST00000461897 DAZAP1Q96EP5 407 aaKnown RBP9.77□□□□□ -0.85
COL4A6-204ENST00000461897 CENPVL3A0A0U1RRI6 287 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 NBR2O15453 112 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 NDUFA3O95167 84 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 TFPI2P48307 235 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 MAJINQ3KP22 176 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 Q56UQ5 140 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 SPATA12Q7Z6I5 190 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 LYPD1Q8N2G4 141 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 NPBQ8NG41 125 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 SGK494Q96LW2 274 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 ST20Q9HBF5 79 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 IGKV1-17P01599 117 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 HES1Q14469 280 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 ATOH7Q8N100 152 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 Q8N6K4 173 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 TMEM75Q8N9X5 138 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 SRSF12Q8WXF0 261 aaKnown RBP9.76□□□□□ -0.85
COL4A6-204ENST00000461897 PGLYRP4Q96LB8 373 aa9.76□□□□□ -0.85
COL4A6-204ENST00000461897 ABCA12Q86UK0 2595 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 APCP25054 2843 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 A0A096LNT2 108 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 IGHV1-24A0A0C4DH33 117 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 ZNF785A8K8V0 405 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 NPFFO15130 113 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 MSMBP08118 114 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 APELAP0DMC3 54 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 EBI3Q14213 229 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 PLGLAQ15195 96 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 SHANK2-AS3Q9BTD1 123 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms