RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 MRAPQ8TCY5 172 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
SSBP1-202ENST00000461433 H3BTX0 84 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 SLC17A3O00476 420 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 ISLRO14498 428 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 TPT1P13693 172 aaKnown RBP8.35□□□□□ -1.07
SSBP1-202ENST00000461433 PSMB3P49720 205 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 CMC4P56277 68 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-202ENST00000461433 ZNF726P1Q15940 193 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 DEFB121Q5J5C9 76 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 LINC00322Q6ZN03 302 aaPredicted RBP8.35□□□□□ -1.07
SSBP1-202ENST00000461433 FXYD5Q96DB9 178 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 OR51M1Q9H341 326 aa8.35□□□□□ -1.07
SSBP1-202ENST00000461433 A0A1W2PPV4 95 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 RBMY1BA6NDE4 496 aaKnown RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 RBMY1EA6NEQ0 496 aaKnown RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 HMGB3O15347 200 aaKnown RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 NDUFB4O95168 129 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 OR10J4P0C629 311 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 RBMY1DP0C7P1 496 aaKnown RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 HIST1H1EP10412 219 aaKnown RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 HLA-DMBP28068 263 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 CDC34P49427 236 aaPredicted RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 EIF5AP63241 154 aaKnown RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 PSMG4Q5JS54 123 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 SLC51BQ86UW2 128 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 RAB24Q969Q5 203 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 C16orf92Q96LL3 132 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 SRD5A3Q9H8P0 318 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 ZNF331Q9NQX6 463 aaPredicted RBP8.34□□□□□ -1.07
SSBP1-202ENST00000461433 AGRNO00468 2067 aa8.34□□□□□ -1.07
SSBP1-202ENST00000461433 TRBV19A0A075B6N1 114 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 FRMD6-AS1P0C7T7 363 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 STAG3L2P0CL84 134 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 STAG3L3P0CL85 134 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 ID1P41134 155 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 DEFB1P60022 68 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 SNRPD3P62318 126 aaKnown RBP8.34□□□□□ -1.08
SSBP1-202ENST00000461433 GUK1Q16774 197 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 KHDC3LQ587J8 217 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 SAMD13Q5VXD3 122 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 LCN15Q6UWW0 184 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 RNF182Q8N6D2 247 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 RNF141Q8WVD5 230 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 TMED6Q8WW62 240 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 LINC00052Q96N35 136 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 PAXXQ9BUH6 204 aa8.34□□□□□ -1.08
SSBP1-202ENST00000461433 BOLA2-SMG1P6H3BVE0 249 aa8.33□□□□□ -1.08
SSBP1-202ENST00000461433 OR7C2O60412 319 aa8.33□□□□□ -1.08
SSBP1-202ENST00000461433 NBEAP1P0C6P0 100 aa8.33□□□□□ -1.08
SSBP1-202ENST00000461433 FHITP49789 147 aa8.33□□□□□ -1.08
SSBP1-202ENST00000461433 TAS2R45P59539 299 aa8.33□□□□□ -1.08
SSBP1-202ENST00000461433 AKR1C8PQ5T2L2 129 aa8.33□□□□□ -1.08
SSBP1-202ENST00000461433 ACTR3CQ9C0K3 210 aaPredicted RBP8.33□□□□□ -1.08
SSBP1-202ENST00000461433 KNCNA6PVL3 124 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 ZNF253O75346 499 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 ARL14EPLP0DKL9 152 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 GDF5OSQ5U4N7 250 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 PQLC2Q6ZP29 291 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 SUN5Q8TC36 379 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 BLNKQ8WV28 456 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 TUBA4BQ9H853 241 aa8.32□□□□□ -1.08
SSBP1-202ENST00000461433 PRKDCP78527 4128 aaKnown RBP8.32□□□□□ -1.08
SSBP1-202ENST00000461433 CTXND1A0A1B0GTU2 59 aa8.31□□□□□ -1.08
SSBP1-202ENST00000461433 UMAD1C9J7I0 102 aa8.31□□□□□ -1.08
SSBP1-202ENST00000461433 C4BPBP20851 252 aa8.31□□□□□ -1.08
SSBP1-202ENST00000461433 PDE6HQ13956 83 aa8.31□□□□□ -1.08
SSBP1-202ENST00000461433 PSG3Q16557 428 aa8.31□□□□□ -1.08
SSBP1-202ENST00000461433 LRRC20Q8TCA0 184 aa8.31□□□□□ -1.08
SSBP1-202ENST00000461433 PHYHIPLQ96FC7 376 aa8.31□□□□□ -1.08
SSBP1-202ENST00000461433 F6UB75 175 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 PRB4P10163 310 aaPredicted RBP8.3□□□□□ -1.08
SSBP1-202ENST00000461433 UBE2L3P68036 154 aaKnown RBP8.3□□□□□ -1.08
SSBP1-202ENST00000461433 ACTL10Q5JWF8 245 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 TRPT1Q86TN4 253 aaKnown RBP8.3□□□□□ -1.08
SSBP1-202ENST00000461433 SAV1Q9H4B6 383 aaPredicted RBP8.3□□□□□ -1.08
SSBP1-202ENST00000461433 A0A0J9YX75 114 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 ZNF705FA8MVS1 300 aaPredicted RBP8.3□□□□□ -1.08
SSBP1-202ENST00000461433 H3BMM0 161 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 CXorf1O96002 111 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 GCHFRP30047 84 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 PSG9Q00887 426 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 EIF5AL1Q6IS14 154 aaKnown RBP8.3□□□□□ -1.08
SSBP1-202ENST00000461433 FOXI2Q6ZQN5 318 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 SBSPONQ8IVN8 264 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 EXOC3-AS1Q8N2X6 119 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 B9D2Q9BPU9 175 aa8.3□□□□□ -1.08
SSBP1-202ENST00000461433 LOC102724200A0A096LPH7 203 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-202ENST00000461433 PRAC2D3DTV9 90 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 M0R3E3 92 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 HLA-DRB4P13762 266 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 RPL35AP18077 110 aaKnown RBP8.29□□□□□ -1.08
SSBP1-202ENST00000461433 SULT1A2P50226 295 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 FGF8P55075 233 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-202ENST00000461433 HAGHQ16775 308 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 DPPA3Q6W0C5 159 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 ZNF738Q8NE65 137 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 FAM213BQ8TBF2 198 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms