RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 STPG4Q8N801 248 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 C20orf144Q9BQM9 153 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 Q6ZS49 121 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 ZNF664Q8N3J9 261 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 PRDM6Q9NQX0 595 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 hADV29S1A0JD25 119 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 DKK1O94907 266 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 LY6DQ14210 128 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 PYY3Q5JQD4 70 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 GGNQ86UU5 652 aa7.29□□□□□ -1.24
BRCA1-205ENST00000461221 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-205ENST00000461221 LTBP4Q8N2S1 1624 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 E9PQ18 207 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 CGB7P0DN87 165 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 FGF6P10767 208 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 BOD1L2Q8IYS8 172 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 IGKV1-27A0A075B6S5 117 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 IGHV1OR15-1A0A075B7D0 117 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 C22orf46C9J442 243 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 FOXG1P55316 489 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-205ENST00000461221 YPEL3P61236 119 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-205ENST00000461221 SRSF2Q01130 221 aaKnown RBP7.28□□□□□ -1.24
BRCA1-205ENST00000461221 VWC2Q2TAL6 325 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 MORN5Q5VZ52 161 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 HERVK_113P63121 156 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 MCRIP2Q9BUT9 160 aaKnown RBP7.28□□□□□ -1.24
BRCA1-205ENST00000461221 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 TSSC4Q9Y5U2 329 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-205ENST00000461221 TPRP12270 2363 aaKnown RBP7.28□□□□□ -1.24
BRCA1-205ENST00000461221 TUBGCP6Q96RT7 1819 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 NBL1P41271 181 aa7.28□□□□□ -1.24
BRCA1-205ENST00000461221 LINC00473A8K010 186 aa7.27□□□□□ -1.24
BRCA1-205ENST00000461221 RBM3P98179 157 aaKnown RBP7.27□□□□□ -1.24
BRCA1-205ENST00000461221 Q6P435 159 aa7.27□□□□□ -1.24
BRCA1-205ENST00000461221 UNC13CQ8NB66 2214 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 EGR2P11161 476 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-205ENST00000461221 LYL1P12980 280 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 HS3ST6Q96QI5 342 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 XCL2Q9UBD3 114 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 MCM3APO60318 1980 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 K7EP34 96 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 CKAP5Q14008 2032 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 KNCNA6PVL3 124 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 NTN3O00634 580 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-205ENST00000461221 NXPH4O95158 308 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 SAA4P35542 130 aa7.27□□□□□ -1.25
BRCA1-205ENST00000461221 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.27□□□□□ -1.25
BRCA1-205ENST00000461221 MAP1BP46821 2468 aaKnown RBP7.26□□□□□ -1.25
BRCA1-205ENST00000461221 A0A087WV48 116 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 TMEM213A2RRL7 107 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 HLA-DRB4P13762 266 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 LGALS9BQ3B8N2 356 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 LGALS9CQ6DKI2 356 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 HLA-DRB4X5D2U9 266 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 SDHAF1A6NFY7 115 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 CHKB-CPT1BH3BT56 60 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 GAGE6Q13070 117 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 REG4Q9BYZ8 158 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 POLR3KQ9Y2Y1 108 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-205ENST00000461221 MST1LQ2TV78 715 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 C18orf32Q8TCD1 76 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 CFHR3Q02985 330 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 SPINK13Q1W4C9 94 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 TMEM105Q8N8V8 129 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 ZNRF2Q8NHG8 242 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 ICE1Q9Y2F5 2266 aa7.26□□□□□ -1.25
BRCA1-205ENST00000461221 TRAV12-1A0A0B4J245 112 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 GNLYP22749 145 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 HLA-DMBP28068 263 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 CFHR2P36980 270 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 MTCL1Q9Y4B5 1905 aaKnown RBP7.25□□□□□ -1.25
BRCA1-205ENST00000461221 IGHV3-16A0A0C4DH30 117 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 UBE2E1P51965 193 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 FLVCR1-AS1Q8TAF5 88 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 IGKV1D-17A0A075B6S4 117 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 CEND1Q8N111 149 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 C8orf49Q96NF6 230 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 A0A0G2JNJ9 132 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 MBD3L4A6NDZ8 208 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-205ENST00000461221 MBD3L3A6NE82 208 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-205ENST00000461221 MBD3L5A6NJ08 208 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-205ENST00000461221 GAGE7O76087 117 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 MBD3L2Q8NHZ7 208 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-205ENST00000461221 Q9UFV3 132 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 KLK9Q9UKQ9 250 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 COX8AP10176 69 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 UBE2BP63146 152 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
BRCA1-205ENST00000461221 A8MWP6 167 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 CDKN1BP46527 198 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 GAS1P54826 345 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 ATP6V0BQ99437 205 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms