RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ERCC6Q03468 1493 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 SHANK1Q9Y566 2161 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 ARHGEF28Q8N1W1 1705 aaKnown RBP1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 TRAV14DV4A0A0A6YYC5 116 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 A0A0G2JQZ4 141 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 K7ERU9 68 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 UQCRQO14949 82 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 C1QCP02747 245 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 FABP4P15090 132 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 MAXP61244 160 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 HES1Q14469 280 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 RPL13AP3Q6NVV1 102 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 PATE2Q6UY27 113 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 LRRC18Q8N456 261 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 MORN4Q8NDC4 146 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 OR5D14Q8NGL3 314 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 SFT2D1Q8WV19 159 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 DIRC1Q969H9 104 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 HYLS1Q96M11 299 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 EML6Q6ZMW3 1958 aa1.84□□□□□ -2.11
SPTLC1-203ENST00000461132 VIRMAQ69YN4 1812 aaKnown RBP1.84□□□□□ -2.12
SPTLC1-203ENST00000461132 ARHGAP32A7KAX9 2087 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 A0A096LPI6 279 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 A0A1B0GW64 132 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 LOC107986453A0A1B0GWG9 222 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 hDV103S1A0JD37 113 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 ZNF737O75373 536 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 MT-ND4LP03901 98 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 HIST1H1BP16401 226 aaKnown RBP1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 SSR2P43308 183 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 NCS1P62166 190 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 ZNF846Q147U1 533 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 HAGHLQ6PII5 290 aaPredicted RBP1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 LINC00311Q8N616 119 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 NAT14Q8WUY8 206 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 POP5Q969H6 163 aaKnown RBP1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 MUCL1Q96DR8 90 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 ZC2HC1AQ96GY0 325 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 OR4C12Q96R67 309 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 TTTY12Q9BZ98 90 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 SCN8AQ9UQD0 1980 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 PIK3C2AO00443 1686 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 WDR90Q96KV7 1748 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 OVOS2A0A0J9YW53 1432 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 DISP2A7MBM2 1401 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 OVOS2Q6IE36 1432 aa1.83□□□□□ -2.12
SPTLC1-203ENST00000461132 SDK2Q58EX2 2172 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 MYH10P35580 1976 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 TRAV27A0A087WT01 109 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 TCRBV4S1A1TA0A5B7 111 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 CRPP02741 224 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 SAA1P0DJI8 122 aaPredicted RBP1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 KDELR1P24390 212 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 BRS3P32247 399 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 FOXA3P55318 350 aaPredicted RBP1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 CTAGE3PQ8IX95 158 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 Q8IYB0 196 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 OR5AK2Q8NH90 309 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 RAB37Q96AX2 223 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 TP53RKQ96S44 253 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 TXNDC17Q9BRA2 123 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 BANF2Q9H503 90 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 DSPPQ9NZW4 1301 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 TAF1LQ8IZX4 1826 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 KIAA1107Q9UPP5 1409 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 NUP210LQ5VU65 1888 aa1.82□□□□□ -2.12
SPTLC1-203ENST00000461132 PTPRBP23467 1997 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 MYO9BQ13459 2157 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 TRAV12-1A0A0B4J245 112 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 K7EP13 123 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 YPEL1O60688 119 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 TRACP01848 142 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 HBDP02042 147 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 GPX1P07203 203 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 ETV6P41212 452 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 DSCR4P56555 118 aaPredicted RBP1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 SELENOWP63302 87 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 SPCS2Q15005 226 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 GLIPR1L1Q6UWM5 242 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 TMEM14EPQ6UXP3 125 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 NUP98P52948 1817 aa1.81□□□□□ -2.12
SPTLC1-203ENST00000461132 SBF1O95248 1867 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 CPAMD8Q8IZJ3 1885 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 PNMA8CA0A1B0GUJ8 204 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 FAM92AA1XBS5 289 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 CCDC160A6NGH7 325 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 E7EUB6 86 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 ERC2-IT1O76042 136 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 NCR2O95944 276 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 TCRAP04437 139 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 ROMO1P60602 79 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 COPZ1P61923 177 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 QRFPP83859 136 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 Q1T7F1 81 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 Q5XG85 94 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 C9orf163Q8N9P6 203 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 KDM6AO15550 1401 aaPredicted RBP1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 DLC1Q96QB1 1528 aa1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 XIRP1Q702N8 1843 aaKnown RBP1.8□□□□□ -2.12
SPTLC1-203ENST00000461132 TRAV10A0A0B4J240 114 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms