RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 KLF2Q9Y5W3 355 aaPredicted RBP6.84□□□□□ -1.31
MCF2L2-205ENST00000461074 RPL15P61313 204 aaKnown RBP6.84□□□□□ -1.31
MCF2L2-205ENST00000461074 FAM231DQ6ZW35 169 aa6.84□□□□□ -1.31
MCF2L2-205ENST00000461074 ATP6V0BQ99437 205 aa6.84□□□□□ -1.31
MCF2L2-205ENST00000461074 NDUFA4L2Q9NRX3 87 aa6.84□□□□□ -1.31
MCF2L2-205ENST00000461074 PAX4O43316 350 aa6.84□□□□□ -1.32
MCF2L2-205ENST00000461074 PFN1P07737 140 aaKnown RBP6.84□□□□□ -1.32
MCF2L2-205ENST00000461074 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.32
MCF2L2-205ENST00000461074 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.32
MCF2L2-205ENST00000461074 TICRRQ7Z2Z1 1910 aa6.84□□□□□ -1.32
MCF2L2-205ENST00000461074 RPP25LQ8N5L8 163 aaKnown RBP6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 IGLV3-9A0A075B6K5 115 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 HGFACQ04756 655 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 DLX4Q92988 240 aaPredicted RBP6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 CSTL1Q9H114 145 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 ZNF318Q5VUA4 2279 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 TNFRSF6BO95407 300 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 POU2AF1Q16633 256 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 PIP4P1Q86T03 277 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 TMEM219Q86XT9 240 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 NUP35Q8NFH5 326 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 GSN-AS1Q9NRJ2 163 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 SPANXCQ9NY87 97 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 PTPRDP23468 1912 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 H3BQ85 93 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 H3BUT2 72 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 I3L3M4 83 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 FCN3O75636 299 aa6.83□□□□□ -1.32
MCF2L2-205ENST00000461074 TRAV12-3A0A0B4J271 114 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 Q0VG73 95 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 KLRD1Q13241 179 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 TMEM158Q8WZ71 300 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 PLXNA2O75051 1894 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 IGHV3OR16-8A0A075B7F1 116 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 LINC00473A8K010 186 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 DAD1P61803 113 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 EXOC3-AS1Q8N2X6 119 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 LINC01545Q5VT33 79 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 WDR81Q562E7 1941 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 CD24P25063 80 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 COL8A2P25067 703 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 NTF4P34130 210 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 FOXE3Q13461 319 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 VWC2LB2RUY7 222 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 MST1LQ2TV78 715 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
MCF2L2-205ENST00000461074 RBAKDNA6NC62 111 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 TMEM249Q2WGJ8 235 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 TCF20Q9UGU0 1960 aaKnown RBP6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 A0A1W2PPI3 338 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 HIST3H2BBQ8N257 126 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 LSM4Q9Y4Z0 139 aaKnown RBP6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 TRAV5A0A0B4J249 113 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 EVI2AP22794 236 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 IGHV1OR15-1A0A075B7D0 117 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 C10orf55Q5SWW7 151 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 LOC102724200A0A096LPH7 203 aaPredicted RBP6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 IGHV2-70P01814 119 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 IGHV4-39P01824 125 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 CD300EQ496F6 205 aaPredicted RBP6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 Q8N8P6 123 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 OR11H6Q8NGC7 330 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 MESP1Q9BRJ9 268 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 MUC21A0A0G2JKD1 596 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 MUC21A0A140T8X8 626 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 HOXD3P31249 432 aaPredicted RBP6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 FOXG1P55316 489 aaPredicted RBP6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 THAP8Q8NA92 274 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 PYGO2Q9BRQ0 406 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 ALPK2Q86TB3 2170 aa6.81□□□□□ -1.32
MCF2L2-205ENST00000461074 CDKN1BP46527 198 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 SDK2Q58EX2 2172 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 SYS1-DBNDD2H3BUS1 97 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 COL4A6Q14031 1691 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 C20orf78Q9BR46 151 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 LRRK1Q38SD2 2015 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 OVOL3O00110 214 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 DEFB121Q5J5C9 76 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 PRIMA1Q86XR5 153 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 ZNF48Q96MX3 618 aaPredicted RBP6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 CITED1Q99966 193 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 C5orf63A6NC05 138 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 TMEM95Q3KNT9 176 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 BRD3OSQ6XYD6 125 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 H3BRN7 92 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 K7EM74 188 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 TMEM243Q9BU79 118 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 TSSC4Q9Y5U2 329 aaPredicted RBP6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 ACACAQ13085 2346 aa6.8□□□□□ -1.32
MCF2L2-205ENST00000461074 TMEM89A2RUT3 159 aa6.79□□□□□ -1.32
MCF2L2-205ENST00000461074 ATP6V0E1O15342 81 aa6.79□□□□□ -1.32
MCF2L2-205ENST00000461074 SELLP14151 372 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms