RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ADIRFQ15847 76 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 TMEM97Q5BJF2 176 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 ASCL4Q6XD76 172 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 TCF23Q7RTU1 214 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 C16orf82Q7Z2V1 217 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 MKXQ8IYA7 352 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 SMIM20Q8N5G0 67 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 TTC9CQ8N5M4 171 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 LRTM2Q8N967 370 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF709Q8N972 641 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 OR51G1Q8NGK1 321 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 IL22RA2Q969J5 263 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 C10orf35Q96D05 121 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 COQ2Q96H96 371 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 C2orf50Q96LR7 162 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 RTBDNQ9BSG5 229 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 HDHD3Q9BSH5 251 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 SPANXDQ9BXN6 97 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 ST20Q9HBF5 79 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 SIGLEC8Q9NYZ4 499 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNRD1Q9P1U0 126 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 TSSC4Q9Y5U2 329 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 WSB1Q9Y6I7 421 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 RYR3Q15413 4870 aa3.79□□□□□ -1.8
ATPAF1-203ENST00000460928 TRBV9A0A0B4J1U6 114 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 CENPVL3A0A0U1RRI6 287 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 MDFIC2A0A1B0GVS7 189 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 MEIS3P1A6NDR6 274 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 H3BRM9 83 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 DEGS1O15121 323 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 ATP6V0E1O15342 81 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 SOCS1O15524 211 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 NDUFB3O43676 98 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 PRSS3P35030 304 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 KIR2DS4P43632 304 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 HINT1P49773 126 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 EDDM3BP56851 147 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 FGF12P61328 243 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 IL15RAQ13261 267 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF266Q14584 549 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 MSMO1Q15800 293 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 KLF17Q5JT82 389 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 C1orf100Q5SVJ3 147 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 FAM120AOSQ5T036 256 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 TMEM78Q5T7P6 136 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 AMMECR1LQ6DCA0 310 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 RPL7L1Q6DKI1 246 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 SPSB3Q6PJ21 355 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 CD164L2Q6UWJ8 174 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 BRD3OSQ6XYD6 125 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 CYP2G1PQ6ZSU1 146 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 OSR2Q8N2R0 312 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 Q8N7P7 452 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 SIGLECL1Q8N7X8 197 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF439Q8NDP4 499 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 OR4F17Q8NGA8 305 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 OR10P1Q8NGE3 313 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 OR8B3Q8NGG8 313 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 OR13A1Q8NGR1 328 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 RFESDQ8TAC1 157 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 AP1S3Q96PC3 154 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 OR4F4Q96R69 305 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 OR8B2Q96RD0 313 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 ST6GALNAC5Q9BVH7 336 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 SAMD10Q9BYL1 202 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 WDR61Q9GZS3 305 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 GTSF1LQ9H1H1 148 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 ONECUT1Q9UBC0 465 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 CKLFQ9UBR5 152 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 KLK11Q9UBX7 282 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 POLDIP2Q9Y2S7 368 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 CSDC2Q9Y534 153 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 RFNGQ9Y644 331 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 PXMP4Q9Y6I8 212 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 V9GY05 133 aa3.78□□□□□ -1.8
ATPAF1-203ENST00000460928 TRAV9-2A0A087WT02 112 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 KIR2DS1A0A191URI9 304 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 B4DSR2 109 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 SLC17A2O00624 439 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 OR7C1O76099 320 aaPredicted RBP3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 VENTXO95231 258 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 SFT2D2O95562 160 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 CYB5AP00167 134 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 SERPINE2P07093 398 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 FRMD6-AS1P0C7T7 363 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 COX7A1P24310 79 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 CDK2P24941 298 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 RPL12P30050 165 aaKnown RBP3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 DLX6P56179 175 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 RBM11P57052 281 aaKnown RBP3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 ZNF146Q15072 292 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 LRRC37A5PQ49AS3 106 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 ZFAND6Q6FIF0 208 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 HCP5Q6MZN7 132 aa3.77□□□□□ -1.81
ATPAF1-203ENST00000460928 COX8CQ7Z4L0 72 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms