RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PSG8Q9UQ74 426 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 A0A1W2PS18 150 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 ZNF785A8K8V0 405 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 SIGLECL1Q8N7X8 197 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 ZNF502Q8TBZ5 544 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 PIMREGQ9BSJ6 248 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 RABAC1Q9UI14 185 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 ABCA2Q9BZC7 2435 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 SH2D7A6NKC9 451 aaPredicted RBP13□□□□□ -0.33
CCDC43-202ENST00000457422 S100A7P31151 101 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
CCDC43-202ENST00000457422 PSG9Q00887 426 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 ZC2HC1AQ96GY0 325 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 CCL19Q99731 98 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 SVEP1Q4LDE5 3571 aa13□□□□□ -0.33
CCDC43-202ENST00000457422 IGHV3OR16-10A0A075B7F0 116 aa12.99□□□□□ -0.33
CCDC43-202ENST00000457422 M0R3E3 92 aa12.99□□□□□ -0.33
CCDC43-202ENST00000457422 ZNF324O75467 553 aaPredicted RBP12.99□□□□□ -0.33
CCDC43-202ENST00000457422 CAMPP49913 170 aa12.99□□□□□ -0.33
CCDC43-202ENST00000457422 C15orf32Q32M92 178 aa12.99□□□□□ -0.33
CCDC43-202ENST00000457422 ASCL2Q99929 193 aa12.99□□□□□ -0.33
CCDC43-202ENST00000457422 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
CCDC43-202ENST00000457422 IGHV4-61A0A0C4DH41 118 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 CD33P20138 364 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 C1orf194Q5T5A4 169 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 C5orf56Q8N8D9 126 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 SSBP4Q9BWG4 385 aaPredicted RBP12.98□□□□□ -0.33
CCDC43-202ENST00000457422 KIR2DL5BA0A0G2JN68 375 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 KIR2DL5BA0A0G2JPC4 375 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 NDUFS8O00217 210 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 AMTP48728 403 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 TEX43Q6ZNM6 134 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 KIR2DL5AQ8N109 375 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 OR2D3Q8NGH3 330 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 C10orf105Q8TEF2 133 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 PGLYRP4Q96LB8 373 aa12.98□□□□□ -0.33
CCDC43-202ENST00000457422 LINC01548A6NM66 108 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 GPR183P32249 361 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 CSN1S1P47710 185 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 RHOGP84095 191 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 SPTAN1Q13813 2472 aaKnown RBP12.97□□□□□ -0.33
CCDC43-202ENST00000457422 ZNF705FA8MVS1 300 aaPredicted RBP12.97□□□□□ -0.33
CCDC43-202ENST00000457422 G3V318 75 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
CCDC43-202ENST00000457422 ZNF705DP0CH99 300 aaPredicted RBP12.97□□□□□ -0.33
CCDC43-202ENST00000457422 ZNF705BP0CI00 300 aaPredicted RBP12.97□□□□□ -0.33
CCDC43-202ENST00000457422 PRR31Q5SQ13 230 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 NDUFAF3Q9BU61 184 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 ZFAND3Q9H8U3 227 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 NRN1Q9NPD7 142 aa12.97□□□□□ -0.33
CCDC43-202ENST00000457422 IGHV1-69DA0A0B4J2H0 117 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.33
CCDC43-202ENST00000457422 HAX1O00165 279 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 IGHV1-69P01742 117 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 TOMM20LQ6UXN7 152 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 TMEM219Q86XT9 240 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 SMAD5-AS1Q9Y6J3 95 aa12.96□□□□□ -0.33
CCDC43-202ENST00000457422 IGSF10Q6WRI0 2623 aa12.96□□□□□ -0.34
CCDC43-202ENST00000457422 IGHV3OR16-8A0A075B7F1 116 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 PMCHP20382 165 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 RAB9AP51151 201 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 MOB4Q9Y3A3 225 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 RNF224P0DH78 156 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 CRIP1P50238 77 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 CRIP2P52943 208 aaPredicted RBP12.95□□□□□ -0.34
CCDC43-202ENST00000457422 NIT1Q86X76 327 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 CCDC140Q96MF4 163 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 RNF114Q9Y508 228 aa12.95□□□□□ -0.34
CCDC43-202ENST00000457422 TRAV40A0A0B4J280 105 aa12.94□□□□□ -0.34
CCDC43-202ENST00000457422 CLEC3BP05452 202 aa12.94□□□□□ -0.34
CCDC43-202ENST00000457422 BRD3OSQ6XYD6 125 aa12.94□□□□□ -0.34
CCDC43-202ENST00000457422 LURAP1LQ8IV03 231 aa12.94□□□□□ -0.34
CCDC43-202ENST00000457422 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
CCDC43-202ENST00000457422 COL12A1Q99715 3063 aa12.94□□□□□ -0.34
CCDC43-202ENST00000457422 C19orf54Q5BKX5 351 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 GATD1Q8NB37 220 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 PIFOQ8TCI5 191 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 EEF1AKMT3Q96AZ1 226 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 A0A087X0K7 114 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 CT45A10P0DMU9 189 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 ATP5J2P56134 94 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 Q6AWC8 147 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 CLEC2AQ6UVW9 174 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 Q8N976 141 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 CACNA1BQ00975 2339 aa12.93□□□□□ -0.34
CCDC43-202ENST00000457422 IGHV4-30-2A0A087WSY4 118 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 A0A1B0GUT8 65 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 CHEK1O14757 476 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 BUB3O43684 328 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 FAM162BQ5T6X4 162 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 DOPEY1Q5JWR5 2465 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 VPS13CQ709C8 3753 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 IGKV2-40A0A087WW87 121 aaPredicted RBP12.92□□□□□ -0.34
CCDC43-202ENST00000457422 A0A1B0GW15 77 aa12.92□□□□□ -0.34
CCDC43-202ENST00000457422 IGKV2D-40P01614 121 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms