RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-222ENST00000457264 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
MRPL55-222ENST00000457264 Q9H3A6 140 aa11.61□□□□□ -0.55
MRPL55-222ENST00000457264 CCDC59Q9P031 241 aaKnown RBP11.61□□□□□ -0.55
MRPL55-222ENST00000457264 RNF24Q9Y225 148 aa11.61□□□□□ -0.55
MRPL55-222ENST00000457264 A0A0J9YY99 117 aa11.6□□□□□ -0.55
MRPL55-222ENST00000457264 AP3S2P59780 193 aa11.6□□□□□ -0.55
MRPL55-222ENST00000457264 PLP1P60201 277 aa11.6□□□□□ -0.55
MRPL55-222ENST00000457264 SELENOTP62341 195 aa11.6□□□□□ -0.55
MRPL55-222ENST00000457264 DYNC2LI1Q8TCX1 351 aa11.6□□□□□ -0.55
MRPL55-222ENST00000457264 LRP1BQ9NZR2 4599 aa11.6□□□□□ -0.55
MRPL55-222ENST00000457264 A0A1W2PPQ1 181 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 ZNF701M0R085 212 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-222ENST00000457264 SFT2D2O95562 160 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 PRB4P10163 310 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-222ENST00000457264 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
MRPL55-222ENST00000457264 TNFSF8P32971 234 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 TOMM5Q8N4H5 51 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 RAB2BQ8WUD1 216 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 SOSTQ9BQB4 213 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 C20orf144Q9BQM9 153 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-222ENST00000457264 MRPS26Q9BYN8 205 aaKnown RBP11.59□□□□□ -0.55
MRPL55-222ENST00000457264 KRTAP1-5Q9BYS1 174 aa11.59□□□□□ -0.55
MRPL55-222ENST00000457264 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 PMS2P5A8MQ11 134 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 GAGE7O76087 117 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 RLN2P04090 185 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 DLK1P80370 383 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 ESRGQ1W209 222 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 ARL6Q9H0F7 186 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 PSENENQ9NZ42 101 aa11.58□□□□□ -0.56
MRPL55-222ENST00000457264 CXCL2P19875 107 aa11.57□□□□□ -0.56
MRPL55-222ENST00000457264 POLR2GP62487 172 aaKnown RBP eCLIP11.57□□□□□ -0.56
MRPL55-222ENST00000457264 ID3Q02535 119 aa11.57□□□□□ -0.56
MRPL55-222ENST00000457264 LINC00612Q8N6U2 182 aa11.57□□□□□ -0.56
MRPL55-222ENST00000457264 MCFD2Q8NI22 146 aa11.57□□□□□ -0.56
MRPL55-222ENST00000457264 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
MRPL55-222ENST00000457264 SNURFLB1AK76 121 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 H3BNG1 76 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 HOXA5P20719 270 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 RRAS2P62070 204 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-222ENST00000457264 PYDC2Q56P42 97 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 LCN15Q6UWW0 184 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 SLC50A1Q9BRV3 221 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 NPVFQ9HCQ7 196 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-222ENST00000457264 ZNF586Q9NXT0 402 aa11.56□□□□□ -0.56
MRPL55-222ENST00000457264 TMBIM6P55061 237 aa11.55□□□□□ -0.56
MRPL55-222ENST00000457264 KIR3DS1Q14943 382 aa11.55□□□□□ -0.56
MRPL55-222ENST00000457264 PXDC1Q5TGL8 231 aa11.55□□□□□ -0.56
MRPL55-222ENST00000457264 CCDC190Q86UF4 302 aa11.55□□□□□ -0.56
MRPL55-222ENST00000457264 BCL7BQ9BQE9 202 aa11.55□□□□□ -0.56
MRPL55-222ENST00000457264 SLIRPQ9GZT3 109 aaKnown RBP11.55□□□□□ -0.56
MRPL55-222ENST00000457264 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
MRPL55-222ENST00000457264 SSSCA1O60232 199 aa11.54□□□□□ -0.56
MRPL55-222ENST00000457264 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
MRPL55-222ENST00000457264 GFI1BQ5VTD9 330 aa11.54□□□□□ -0.56
MRPL55-222ENST00000457264 TEPPQ6URK8 271 aa11.54□□□□□ -0.56
MRPL55-222ENST00000457264 OR10P1Q8NGE3 313 aa11.54□□□□□ -0.56
MRPL55-222ENST00000457264 TRIM63Q969Q1 353 aa11.54□□□□□ -0.56
MRPL55-222ENST00000457264 SMIM8Q96KF7 97 aa11.54□□□□□ -0.56
MRPL55-222ENST00000457264 PARD6GQ9BYG4 376 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-222ENST00000457264 MGAT4CQ9UBM8 478 aa11.54□□□□□ -0.56
MRPL55-222ENST00000457264 EPM2AB3EWF7 344 aa11.53□□□□□ -0.56
MRPL55-222ENST00000457264 K7EPK0 472 aa11.53□□□□□ -0.56
MRPL55-222ENST00000457264 GOSR2O14653 212 aa11.53□□□□□ -0.56
MRPL55-222ENST00000457264 LINC00305Q7Z4B0 112 aa11.53□□□□□ -0.56
MRPL55-222ENST00000457264 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
MRPL55-222ENST00000457264 DEDD2Q8WXF8 326 aa11.53□□□□□ -0.56
MRPL55-222ENST00000457264 PGPEP1Q9NXJ5 209 aa11.53□□□□□ -0.56
MRPL55-222ENST00000457264 FNDC10F2Z333 226 aa11.52□□□□□ -0.57
MRPL55-222ENST00000457264 J3KRW8 73 aa11.52□□□□□ -0.57
MRPL55-222ENST00000457264 NOL3O60936 208 aaKnown RBP11.52□□□□□ -0.57
MRPL55-222ENST00000457264 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
MRPL55-222ENST00000457264 UBE2MP61081 183 aaKnown RBP11.52□□□□□ -0.57
MRPL55-222ENST00000457264 SLC38A11Q08AI6 406 aa11.52□□□□□ -0.57
MRPL55-222ENST00000457264 ZNF546Q86UE3 836 aa11.52□□□□□ -0.57
MRPL55-222ENST00000457264 TMPRSS5Q9H3S3 457 aa11.52□□□□□ -0.57
MRPL55-222ENST00000457264 PTTG2Q9NZH5 202 aa11.52□□□□□ -0.57
MRPL55-222ENST00000457264 DNAH5Q8TE73 4624 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 TRGV2A0A075B6R0 118 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 PRAC2D3DTV9 90 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 EREGO14944 169 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 CCNKO75909 580 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 LEPP41159 167 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 LINC00315P59091 139 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 DAZ2Q13117 558 aaKnown RBP11.51□□□□□ -0.57
MRPL55-222ENST00000457264 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 PYGO2Q9BRQ0 406 aa11.51□□□□□ -0.57
MRPL55-222ENST00000457264 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms