RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 ZNF138P52744 262 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 NDUFB8O95169 186 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 CTRLP40313 264 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 MFAP4P55083 255 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 UCNP55089 124 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 ZNF414Q96IQ9 312 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 LY6DQ14210 128 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 C8orf49Q96NF6 230 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 C21orf62Q9NYP8 219 aa9.6□□□□□ -0.87
SEMA4D-213ENST00000455551 TMSB15BA0A087X1C1 80 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 F8W735 103 aaPredicted RBP9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 CSN3P07498 182 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 TMEM11P17152 192 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 HOXB4P17483 251 aaPredicted RBP9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 ZNF562Q6V9R5 426 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 UBTD1Q9HAC8 227 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 WI2-2373I1.2A0A1W2PRP0 233 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 NPIPB6E9PJ23 425 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 MRPS12O15235 138 aaKnown RBP9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 IGFL4Q6B9Z1 124 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 LINC00173Q6ZV60 143 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 SPATA12Q7Z6I5 190 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 TXN2Q99757 166 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 K7EQM0 130 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 PSG3Q16557 428 aa9.59□□□□□ -0.87
SEMA4D-213ENST00000455551 FAM120AOSQ5T036 256 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 Q6ZN92 141 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 TMEM75Q8N9X5 138 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 CRIP1P50238 77 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 CCDC144NLQ6NUI1 221 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 SOX21Q9Y651 276 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 IGKV2-40A0A087WW87 121 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 NPIPB5A8MRT5 1133 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 IGKV2D-40P01614 121 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 BTF3P20290 206 aaKnown RBP9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 TFPI2P48307 235 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 AAMDCQ9H7C9 122 aa9.58□□□□□ -0.88
SEMA4D-213ENST00000455551 MUC21A0A0G2JKD1 596 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 MUC21A0A140T8X8 626 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 C2orf70A6NJV1 201 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 RPLP1P05386 114 aaKnown RBP9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 IGLC3P0DOY3 106 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 ECSCRQ19T08 205 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 MUC21Q5SSG8 566 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 RNF24Q9Y225 148 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 TRAV30A0A087WSZ9 112 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 IGHV1-24A0A0C4DH33 117 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 APOHP02749 345 aaPredicted RBP9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 LPAR2Q9HBW0 351 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 IGHV7-81A0A0B4J1V7 117 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 A0A1B0GUT8 65 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 H0Y8G0 127 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 ZNF124Q15973 351 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 TTC9CQ8N5M4 171 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 TMUB1Q9BVT8 246 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 ZFP30Q9Y2G7 519 aa9.57□□□□□ -0.88
SEMA4D-213ENST00000455551 MCRIP2Q9BUT9 160 aaKnown RBP9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 C1RLQ9NZP8 487 aa9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 M0QZK8 103 aa9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 CT45A10P0DMU9 189 aa9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 HLA-DMBP28068 263 aa9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 HNRNPA3P51991 378 aaKnown RBP9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 DTX2Q86UW9 622 aa9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 Q8N6K4 173 aa9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 Q8TAT8 98 aa9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 MAP1AP78559 2803 aaPredicted RBP9.56□□□□□ -0.88
SEMA4D-213ENST00000455551 FAM231BA6NCW3 169 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 OVOL3O00110 214 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 HAX1O00165 279 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 TCTAP57738 103 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 LYPD1Q8N2G4 141 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 THYN1Q9P016 225 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 TP73-AS1Q9UF72 201 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 EGR2P11161 476 aaPredicted RBP9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 C16orf54Q6UWD8 224 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 TMEM70Q9BUB7 260 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 CTSGP08311 255 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 LINC00614P0C842 121 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 GPR183P32249 361 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 CSN1S1P47710 185 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 ITPR1Q14643 2758 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 SPG11Q96JI7 2443 aa9.55□□□□□ -0.88
SEMA4D-213ENST00000455551 LEPROTL1O95214 131 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 PCP4P48539 62 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 NHLH1Q02575 133 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 Q8N9W7 124 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 SIRPDQ9H106 197 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 ZFHX3Q15911 3703 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 RIGQ13278 110 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 UNQ5815/PRO19632Q6UWF5 114 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 IGHV3OR16-13A0A075B7E8 117 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 IGHV3-74A0A0B4J1X5 117 aa9.54□□□□□ -0.88
SEMA4D-213ENST00000455551 IGHV3-66A0A0C4DH42 116 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms