RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 POLR3KQ9Y2Y1 108 aaPredicted RBP9.17□□□□□ -0.94
VTA1-203ENST00000452973 MOB4Q9Y3A3 225 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 IZUMO1RA6ND01 250 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 COA6Q5JTJ3 125 aaKnown RBP9.17□□□□□ -0.94
VTA1-203ENST00000452973 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 TMEM18Q96B42 140 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 MLST8Q9BVC4 326 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 AAMDCQ9H7C9 122 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 CD33P20138 364 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 TOMM20LQ6UXN7 152 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 ZNF502Q8TBZ5 544 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 MRPS12O15235 138 aaKnown RBP9.16□□□□□ -0.94
VTA1-203ENST00000452973 IGLV2-11P01706 119 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 S100A7AQ86SG5 101 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 PGLYRP4Q96LB8 373 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 RNF24Q9Y225 148 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 DOPEY2Q9Y3R5 2298 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 TRAV41A0A0B4J266 112 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 BMPR1BO00238 502 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 SERF1AO75920 110 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 SRSF1Q07955 248 aaKnown RBP eCLIP9.16□□□□□ -0.94
VTA1-203ENST00000452973 GBGT1Q8N5D6 347 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 TSKUQ8WUA8 353 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 MBD6Q96DN6 1003 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 CCDC140Q96MF4 163 aa9.16□□□□□ -0.94
VTA1-203ENST00000452973 ZNF48Q96MX3 618 aaPredicted RBP9.16□□□□□ -0.94
VTA1-203ENST00000452973 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
VTA1-203ENST00000452973 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
VTA1-203ENST00000452973 K7EQM0 130 aa9.15□□□□□ -0.94
VTA1-203ENST00000452973 SRIP30626 198 aa9.15□□□□□ -0.94
VTA1-203ENST00000452973 BLCAPP62952 87 aa9.15□□□□□ -0.94
VTA1-203ENST00000452973 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
VTA1-203ENST00000452973 VN1R17PQ8TDU5 208 aa9.15□□□□□ -0.94
VTA1-203ENST00000452973 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.95
VTA1-203ENST00000452973 B4DSR2 109 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.95
VTA1-203ENST00000452973 TRGV3P03979 118 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 RPL7P18124 248 aaKnown RBP9.15□□□□□ -0.95
VTA1-203ENST00000452973 SLAQ13239 276 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 LCNL1Q6ZST4 164 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 TPPP3Q9BW30 176 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 PSG8Q9UQ74 426 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 TLN2Q9Y4G6 2542 aa9.15□□□□□ -0.95
VTA1-203ENST00000452973 ZNF785A8K8V0 405 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 ZNF705FA8MVS1 300 aaPredicted RBP9.14□□□□□ -0.95
VTA1-203ENST00000452973 APCSP02743 223 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 Q6ZS46 218 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 ZC2HC1AQ96GY0 325 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 DIRC3C9JPN6 131 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 CSN1S1P47710 185 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 ATP5G2Q06055 141 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 PRO1933Q9H354 126 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 TRBV9A0A0B4J1U6 114 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 ZNF253O75346 499 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 GOSR1O95249 250 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 TGFAP01135 160 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 IGHV3-11P01762 117 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 KRTAP10-9P60411 292 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 PSG3Q16557 428 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 GDF5OSQ5U4N7 250 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 GTSF1Q8WW33 167 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 TXN2Q99757 166 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 SMAD5-AS1Q9Y6J3 95 aa9.14□□□□□ -0.95
VTA1-203ENST00000452973 A8MWL6 223 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 APOHP02749 345 aaPredicted RBP9.13□□□□□ -0.95
VTA1-203ENST00000452973 MT-ND6P03923 174 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 TPPP2P59282 170 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 SAMD10Q9BYL1 202 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 OR5R1Q8NH85 324 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 Q8TAT8 98 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 SELENOKQ9Y6D0 94 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 CREBBPQ92793 2442 aa9.13□□□□□ -0.95
VTA1-203ENST00000452973 C19orf71A6NCJ1 209 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 SCGB1D1O95968 90 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 RNF182Q8N6D2 247 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 MEGF9Q9H1U4 602 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 LINC00310P59036 64 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 RCHY1Q96PM5 261 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 PRSS22Q9GZN4 317 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 CCDC168Q8NDH2 2452 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 RNF223E7ERA6 249 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 TRBV12-3P01733 135 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 PF4V1P10720 104 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 JOSD1Q15040 202 aaPredicted RBP9.12□□□□□ -0.95
VTA1-203ENST00000452973 TMEM75Q8N9X5 138 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
VTA1-203ENST00000452973 S100A12P80511 92 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms