RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 CSTL1Q9H114 145 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 A0A0G2JRQ6 117 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 DERL1Q9BUN8 251 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 LOXP28300 417 aaPredicted RBP8.22□□□□□ -1.09
SCN10A-201ENST00000449082 HS3ST6Q96QI5 342 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 FAM215AQ9Y5M1 114 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 E9PQ18 207 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 SS18Q15532 418 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 IL17RELQ6ZVW7 336 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 LINC00311Q8N616 119 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 NUP35Q8NFH5 326 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 TMEM14BQ9NUH8 114 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 TANC1Q9C0D5 1861 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 TP53BP1Q12888 1972 aaPredicted RBP8.22□□□□□ -1.09
SCN10A-201ENST00000449082 REG4Q9BYZ8 158 aa8.22□□□□□ -1.09
SCN10A-201ENST00000449082 M0R2P5 195 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BKO60814 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BJP06899 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BOP23527 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BBP33778 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BDP58876 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BCP62807 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST2H2BEQ16778 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.21□□□□□ -1.09
SCN10A-201ENST00000449082 MTURNQ8N3F0 131 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BHQ93079 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BNQ99877 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 NDUFA4L2Q9NRX3 87 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 KIAA1671Q9BY89 1806 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 TRAV8-1A0A0A6YYK1 113 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 GGTLC3B5MD39 225 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 C17orf58Q2M2W7 97 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 C1orf159Q96HA4 380 aa8.21□□□□□ -1.09
SCN10A-201ENST00000449082 NCOR1O75376 2440 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 H3BUT2 72 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 Q6ZRM9 215 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 FAM90A2PQ658T7 463 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 Q86TA4 180 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 MS4A6AQ9H2W1 248 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 PAX4O43316 350 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 DAD1P61803 113 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 C1orf122Q6ZSJ8 110 aa8.21□□□□□ -1.1
SCN10A-201ENST00000449082 LRRK1Q38SD2 2015 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 IGKV1-6A0A0C4DH72 117 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 A0A1B0GV90 55 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 G3V318 75 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 CFPP27918 469 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 APOC4P55056 127 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 IGLV3-9A0A075B6K5 115 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 A0A087WWL8 130 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 ARTNQ5T4W7 220 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 XCL2Q9UBD3 114 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 PHF3Q92576 2039 aaKnown RBP8.2□□□□□ -1.1
SCN10A-201ENST00000449082 CACNA1GO43497 2377 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 MST1LQ2TV78 715 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 TMEM95Q3KNT9 176 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 C1orf194Q5T5A4 169 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
SCN10A-201ENST00000449082 RHODO00212 210 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 NDUFA4O00483 81 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 LYL1P12980 280 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 ORAOV1Q8WV07 137 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 LIME1Q9H400 295 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 TSC2P49815 1807 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.2□□□□□ -1.1
SCN10A-201ENST00000449082 SRSF4Q08170 494 aaKnown RBP8.2□□□□□ -1.1
SCN10A-201ENST00000449082 TRPT1Q86TN4 253 aaKnown RBP8.2□□□□□ -1.1
SCN10A-201ENST00000449082 TMEM75Q8N9X5 138 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 FANCMQ8IYD8 2048 aa8.2□□□□□ -1.1
SCN10A-201ENST00000449082 DEFB104AQ8WTQ1 72 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 MPDZO75970 2070 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 DOCK8Q8NF50 2099 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 WDR86Q86TI4 376 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 WDR81Q562E7 1941 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 ARMS2P0C7Q2 107 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 PLXNA4Q9HCM2 1894 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 F5H768 121 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 TCTEX1D4Q5JR98 221 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 GFRA4Q9GZZ7 299 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 DKK1O94907 266 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 HSD52Q0P140 79 aa8.19□□□□□ -1.1
SCN10A-201ENST00000449082 DIDO1Q9BTC0 2240 aaKnown RBP8.19□□□□□ -1.1
SCN10A-201ENST00000449082 TRAV8-2A0A0B4J237 113 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 CXCL1P09341 107 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 ATXN8Q156A1 80 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 DUX4L9Q6RFH8 374 aaPredicted RBP8.18□□□□□ -1.1
SCN10A-201ENST00000449082 ZNF503-AS2A6NEH8 195 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 SPINK13Q1W4C9 94 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 RIF1Q5UIP0 2472 aaKnown RBP8.18□□□□□ -1.1
SCN10A-201ENST00000449082 TRAV13-1A0A0B4J241 112 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 TCF15Q12870 199 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 FRMPD3Q5JV73 1810 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 PTPRDP23468 1912 aa8.18□□□□□ -1.1
SCN10A-201ENST00000449082 GSN-AS1Q9NRJ2 163 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms