RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 PPT1P50897 306 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 RND2P52198 227 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 TCL1AP56279 114 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 RHOBP62745 196 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 RPL19P84098 196 aaKnown RBP1.96□□□□□ -2.1
PMS1-215ENST00000447232 HIST1H1AQ02539 215 aaPredicted RBP1.96□□□□□ -2.1
PMS1-215ENST00000447232 INSL4Q14641 139 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 RAB11BQ15907 218 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 KRTAP19-2Q3LHN2 52 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 FAM122CQ6P4D5 195 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 CNIH2Q6PI25 160 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 DEFB107AQ8IZN7 70 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 RNF182Q8N6D2 247 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 OR52I1Q8NGK6 324 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 Q8TAT8 98 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 SECTM1Q8WVN6 248 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 RAB3CQ96E17 227 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 GABARAPL1Q9H0R8 117 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 DAPK2Q9UIK4 370 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 KLF12Q9Y4X4 402 aa1.96□□□□□ -2.1
PMS1-215ENST00000447232 IGKV2D-24A0A075B6R9 120 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 TRGV4A0A0C4DH28 118 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 LOC100131303A0A0U1RQF7 123 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 SNTNA6NMZ2 147 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 CRYGAP11844 174 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 PSMA1P25786 263 aaKnown RBP1.95□□□□□ -2.1
PMS1-215ENST00000447232 HSD17B12Q53GQ0 312 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 ZNF818PQ6ZRF7 136 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 ZNF485Q8NCK3 441 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 GTSF1Q8WW33 167 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 PHYHIPQ92561 330 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 FGF20Q9NP95 211 aaPredicted RBP1.95□□□□□ -2.1
PMS1-215ENST00000447232 IGKV1OR2-108A0A075B7D4 117 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 TEX13DA0A0J9YY54 714 aaPredicted RBP1.95□□□□□ -2.1
PMS1-215ENST00000447232 GGTLC3B5MD39 225 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 FKBP6O75344 327 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 SFTA3P0C7M3 94 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 SLC25A4P12235 298 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 HIST1H1DP16402 221 aaKnown RBP1.95□□□□□ -2.1
PMS1-215ENST00000447232 LPAR6P43657 344 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 ETV1P50549 477 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 SUB1P53999 127 aaKnown RBP eCLIP1.95□□□□□ -2.1
PMS1-215ENST00000447232 RPL36AP83881 106 aaKnown RBP1.95□□□□□ -2.1
PMS1-215ENST00000447232 TPRXLQ17RH7 258 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 AADACL3Q5VUY0 350 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 OR8I2Q8N0Y5 310 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 TRIM63Q969Q1 353 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 ATP6V1G3Q96LB4 118 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 PARD6GQ9BYG4 376 aaPredicted RBP1.95□□□□□ -2.1
PMS1-215ENST00000447232 MRPL16Q9NX20 251 aaKnown RBP1.95□□□□□ -2.1
PMS1-215ENST00000447232 PPP1R14DQ9NXH3 145 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 RAB21Q9UL25 225 aa1.95□□□□□ -2.1
PMS1-215ENST00000447232 PNMA8CA0A1B0GUJ8 204 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 GAGE12JA6NER3 117 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 AQP12BA6NM10 295 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 USP17L23D6RBM5 183 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 SLC17A2O00624 439 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 PPYP01298 95 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 GATA1P15976 413 aaPredicted RBP1.94□□□□□ -2.1
PMS1-215ENST00000447232 MAPK3P27361 379 aaPredicted RBP1.94□□□□□ -2.1
PMS1-215ENST00000447232 GALR1P47211 349 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 SPINK9Q5DT21 86 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 HACD4Q5VWC8 232 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 TMPRSS11AQ6ZMR5 421 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 AQP12AQ8IXF9 295 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 ZNF738Q8NE65 137 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 OR10G4Q8NGN3 311 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 OR10R2Q8NGX6 335 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 NPIPB3Q92617 1050 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 SEC22AQ96IW7 307 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 GFI1Q99684 422 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 RSG1Q9BU20 258 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 PBDC1Q9BVG4 233 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 SLC5A7Q9GZV3 580 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 AMBNQ9NP70 447 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 ELF5Q9UKW6 265 aaPredicted RBP1.94□□□□□ -2.1
PMS1-215ENST00000447232 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
PMS1-215ENST00000447232 A0A075B6Q4 140 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 IGHV1OR15-1A0A075B7D0 117 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 MUC21A0A0G2JKD1 596 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 ERICH4A6NGS2 130 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 G3V2T6 193 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 CXCL3P19876 107 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 FCGR2CP31995 323 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 TALDO1P37837 337 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 WNT4P56705 351 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 ARPC4P59998 168 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 FLOT2Q14254 428 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 Q6ZRP5 223 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 NOXA1Q86UR1 476 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 NHLRC2Q8NBF2 726 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 OR4A16Q8NH70 328 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 ZNF431Q8TF32 576 aaPredicted RBP1.94□□□□□ -2.1
PMS1-215ENST00000447232 ANXA10Q9UJ72 324 aa1.94□□□□□ -2.1
PMS1-215ENST00000447232 IGLV1-50A0A075B6I6 118 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 TRAV12-3A0A0B4J271 114 aa1.93□□□□□ -2.1
PMS1-215ENST00000447232 ATG12O94817 140 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms