RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 SND1-IT1Q9HBX3 110 aa2.04□□□□□ -2.08
UBBP3-201ENST00000445497 NXT2Q9NPJ8 142 aaKnown RBP2.04□□□□□ -2.08
UBBP3-201ENST00000445497 MYH13Q9UKX3 1938 aa2.04□□□□□ -2.08
UBBP3-201ENST00000445497 HHLA3Q9XRX5 114 aa2.04□□□□□ -2.08
UBBP3-201ENST00000445497 OTOFQ9HC10 1997 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 DICER1Q9UPY3 1922 aaKnown RBP2.03□□□□□ -2.08
UBBP3-201ENST00000445497 KIF13BQ9NQT8 1826 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 DIP2CQ9Y2E4 1556 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 ADGRB3O60242 1522 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 C1orf167Q5SNV9 1468 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 IGKV6D-21A0A0A0MT36 114 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 IGHV1-24A0A0C4DH33 117 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 A0A0G2JND7 137 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 hADV29S1A0JD25 119 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 SRRM5B3KS81 715 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 C16orf97H3BN30 126 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 K7EM74 188 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 IGHV3-13P01766 116 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 CCKP06307 115 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 INAFM2P0DMQ5 153 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 COX8AP10176 69 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 SPINK2P20155 84 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 BSPH1Q075Z2 132 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 ZNF791Q3KP31 576 aaPredicted RBP2.03□□□□□ -2.08
UBBP3-201ENST00000445497 C10orf25Q5T742 122 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 C9orf57Q5W0N0 161 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 SLC48A1Q6P1K1 146 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 SPATA12Q7Z6I5 190 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 DEFB107AQ8IZN7 70 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.03□□□□□ -2.08
UBBP3-201ENST00000445497 Q8N8P6 123 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 Q8N976 141 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 CCL4L1Q8NHW4 92 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 DYNLRB2Q8TF09 96 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 FAM168AQ92567 244 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 OR8B2Q96RD0 313 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 UPK3BQ9BT76 320 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 CHCHD7Q9BUK0 85 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 CST11Q9H112 138 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 CXCL16Q9H2A7 254 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 DYNLRB1Q9NP97 96 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 ZNF71Q9NQZ8 489 aaPredicted RBP2.03□□□□□ -2.08
UBBP3-201ENST00000445497 RALGAPA1Q6GYQ0 2036 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 VWA8A3KMH1 1905 aa2.03□□□□□ -2.08
UBBP3-201ENST00000445497 PEAK1Q9H792 1746 aa2.03□□□□□ -2.09
UBBP3-201ENST00000445497 LAMC1P11047 1609 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 ABCA8O94911 1581 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 RALGAPBQ86X10 1494 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 EDC4Q6P2E9 1401 aaKnown RBP2.02□□□□□ -2.09
UBBP3-201ENST00000445497 ATG2AQ2TAZ0 1938 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 IGLV8-61A0A075B6I0 122 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 TRBV6-7A0A0A0MS04 114 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV3-21A0A0B4J1V1 117 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV3-43A0A0B4J1X8 118 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 TRAV3A0A0B4J244 114 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV3-16A0A0C4DH30 117 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV7-4-1A0A0J9YVY3 117 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 TCRBV4S1A1TA0A5B7 111 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 A6NIN4 97 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 KRTAP4-16G5E9R7 235 aaPredicted RBP2.02□□□□□ -2.09
UBBP3-201ENST00000445497 ASAH2BP0C7U1 165 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV3-30-3P0DP02 117 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 PI3P19957 117 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 PEBP1P30086 187 aaKnown RBP2.02□□□□□ -2.09
UBBP3-201ENST00000445497 SLURP1P55000 103 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 TSPEAR-AS2P59090 65 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 REG3AQ06141 175 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 SS18Q15532 418 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 MRPL51Q4U2R6 128 aaKnown RBP2.02□□□□□ -2.09
UBBP3-201ENST00000445497 C9orf66Q5T8R8 295 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 FAM104BQ5XKR9 115 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 CEMP1Q6PRD7 247 aaPredicted RBP2.02□□□□□ -2.09
UBBP3-201ENST00000445497 LYPD2Q6UXB3 125 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 PATE2Q6UY27 113 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 TOMM5Q8N4H5 51 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 NPBQ8NG41 125 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 CHCHD1Q96BP2 118 aaKnown RBP2.02□□□□□ -2.09
UBBP3-201ENST00000445497 Q96M85 177 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 C8orf49Q96NF6 230 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 GOLGA2P5Q9HBQ8 144 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 SCRT2Q9NQ03 307 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 HIGD1BQ9P298 99 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 TRAPPC1Q9Y5R8 145 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 SIPA1L1O43166 1804 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 LRRIQ1Q96JM4 1722 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.02□□□□□ -2.09
UBBP3-201ENST00000445497 ABCA6Q8N139 1617 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 UGGT1Q9NYU2 1555 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 DIP2BQ9P265 1576 aa2.02□□□□□ -2.09
UBBP3-201ENST00000445497 NUP210Q8TEM1 1887 aaPredicted RBP2.01□□□□□ -2.09
UBBP3-201ENST00000445497 CDK5RAP2Q96SN8 1893 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV3-49A0A0A0MS15 119 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 TRAV1-1A0A0B4J248 108 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 IGKV6-21A0A0C4DH24 114 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV3-35A0A0C4DH35 117 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 IGHV3-66A0A0C4DH42 116 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 IGKV1-12A0A0C4DH73 117 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 LY6G6EA0A0G2JKS1 128 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 A6NN06 94 aa2.01□□□□□ -2.09
UBBP3-201ENST00000445497 C17orf51A8MQB3 221 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms