RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 D6R8Y8 96 aa18.05■□□□□ 0.48
CTDSPL-206ENST00000443503 ZNF418Q8TF45 676 aaPredicted RBP18.05■□□□□ 0.48
CTDSPL-206ENST00000443503 IFI27L1Q96BM0 104 aa18.05■□□□□ 0.48
CTDSPL-206ENST00000443503 SHANK2-AS3Q9BTD1 123 aa18.05■□□□□ 0.48
CTDSPL-206ENST00000443503 ZNF688P0C7X2 276 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 ZNF138P52744 262 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 PSG3Q16557 428 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 JKAMPQ9P055 326 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 TNCP24821 2201 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 IGFL2Q6UWQ7 119 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 SPRY4Q9C004 299 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 SMIM13P0DJ93 91 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 MEIG1Q5JSS6 88 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 LYPD1Q8N2G4 141 aa18.04■□□□□ 0.48
CTDSPL-206ENST00000443503 RASL11AQ6T310 242 aa18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 DSCR9P59020 149 aa18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 LINC00311Q8N616 119 aa18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 DYSFO75923 2080 aa18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 NBL1P41271 181 aa18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 KRTAP27-1Q3LI81 207 aa18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 SRSF8Q9BRL6 282 aaKnown RBP18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 C10orf91Q5T1B1 145 aa18.03■□□□□ 0.48
CTDSPL-206ENST00000443503 GGTLC3B5MD39 225 aa18.02■□□□□ 0.48
CTDSPL-206ENST00000443503 SH2D1AO60880 128 aa18.02■□□□□ 0.48
CTDSPL-206ENST00000443503 DUSP14O95147 198 aaKnown RBP18.02■□□□□ 0.48
CTDSPL-206ENST00000443503 COTL1Q14019 142 aa18.02■□□□□ 0.48
CTDSPL-206ENST00000443503 ST20Q9HBF5 79 aa18.02■□□□□ 0.48
CTDSPL-206ENST00000443503 TRBV7-1A0A0A6YYK4 115 aa18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 CIRBPQ14011 172 aaKnown RBP18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 SPRNQ5BIV9 151 aa18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 C9orf139Q6ZV77 190 aa18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 Q86TA4 180 aa18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 ZNF106Q9H2Y7 1883 aaKnown RBP18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 A0A1B0GUS0 222 aa18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 NDUFB8O95169 186 aa18.02■□□□□ 0.47
CTDSPL-206ENST00000443503 SRSF1Q07955 248 aaKnown RBP eCLIP18.01■□□□□ 0.47
CTDSPL-206ENST00000443503 RUSC1-AS1Q66K80 236 aa18.01■□□□□ 0.47
CTDSPL-206ENST00000443503 CYB5R2Q6BCY4 276 aa18.01■□□□□ 0.47
CTDSPL-206ENST00000443503 C3orf79P0CE67 100 aa18■□□□□ 0.47
CTDSPL-206ENST00000443503 DMRTA1Q5VZB9 504 aa18■□□□□ 0.47
CTDSPL-206ENST00000443503 ZNF114Q8NC26 417 aa18■□□□□ 0.47
CTDSPL-206ENST00000443503 BEX4Q9NWD9 120 aaPredicted RBP18■□□□□ 0.47
CTDSPL-206ENST00000443503 ATP6V0E1O15342 81 aa18■□□□□ 0.47
CTDSPL-206ENST00000443503 DMRTC2Q8IXT2 367 aaPredicted RBP18■□□□□ 0.47
CTDSPL-206ENST00000443503 UBE2E1P51965 193 aa18■□□□□ 0.47
CTDSPL-206ENST00000443503 FXYD7P58549 80 aa18■□□□□ 0.47
CTDSPL-206ENST00000443503 TMEM190Q8WZ59 177 aa17.99■□□□□ 0.47
CTDSPL-206ENST00000443503 EMP1P54849 157 aa17.99■□□□□ 0.47
CTDSPL-206ENST00000443503 G3V318 75 aa17.99■□□□□ 0.47
CTDSPL-206ENST00000443503 WISP2O76076 250 aa17.99■□□□□ 0.47
CTDSPL-206ENST00000443503 COL4A4P53420 1690 aaPredicted RBP17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 GRNP28799 593 aaKnown RBP17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 POU2AF1Q16633 256 aa17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 JMJD8Q96S16 334 aa17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 CTSZQ9UBR2 303 aa17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 CYSLTR1Q9Y271 337 aa17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 ADAMTS9Q9P2N4 1935 aa17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 TRGV2A0A075B6R0 118 aa17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 MYO9AB2RTY4 2548 aa17.98■□□□□ 0.47
CTDSPL-206ENST00000443503 SLX1AQ9BQ83 275 aa17.97■□□□□ 0.47
CTDSPL-206ENST00000443503 FCN3O75636 299 aa17.97■□□□□ 0.47
CTDSPL-206ENST00000443503 C1orf194Q5T5A4 169 aa17.97■□□□□ 0.47
CTDSPL-206ENST00000443503 KAAG1Q9UBP8 84 aa17.97■□□□□ 0.47
CTDSPL-206ENST00000443503 DPM2O94777 84 aa17.97■□□□□ 0.47
CTDSPL-206ENST00000443503 APOMO95445 188 aa17.97■□□□□ 0.47
CTDSPL-206ENST00000443503 OVOL3O00110 214 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 TCF15Q12870 199 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 ORMDL2Q53FV1 153 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 STHQ8IWL8 128 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 AMN1Q8IY45 258 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 RHPN1-AS1Q9BWJ2 59 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 TMEM262E9PQX1 116 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 PDE6HQ13956 83 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 MRPL16Q9NX20 251 aaKnown RBP17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 ARMS2P0C7Q2 107 aa17.96■□□□□ 0.47
CTDSPL-206ENST00000443503 EML6Q6ZMW3 1958 aa17.96■□□□□ 0.46
CTDSPL-206ENST00000443503 MRAP2Q96G30 205 aa17.95■□□□□ 0.46
CTDSPL-206ENST00000443503 MED12LQ86YW9 2145 aa17.95■□□□□ 0.46
CTDSPL-206ENST00000443503 USMG5Q96IX5 58 aa17.95■□□□□ 0.46
CTDSPL-206ENST00000443503 DENND4AQ7Z401 1863 aa17.95■□□□□ 0.46
CTDSPL-206ENST00000443503 NDUFS7O75251 213 aa17.95■□□□□ 0.46
CTDSPL-206ENST00000443503 YPEL3P61236 119 aaPredicted RBP17.95■□□□□ 0.46
CTDSPL-206ENST00000443503 SLC25A2Q9BXI2 301 aa17.95■□□□□ 0.46
CTDSPL-206ENST00000443503 ERCC8Q13216 396 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 DEFB104AQ8WTQ1 72 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 VCX2Q9H322 139 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 C22orf46C9J442 243 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 LYPD6BQ8NI32 183 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 SMIM12Q96EX1 92 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 FNDC4Q9H6D8 234 aaPredicted RBP17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 MRPL27Q9P0M9 148 aaKnown RBP17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 PIP4P2Q8N4L2 257 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 MAPK1IP1LQ8NDC0 245 aa17.94■□□□□ 0.46
CTDSPL-206ENST00000443503 SHISA9B4DS77 424 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 SMKR1H3BMG3 65 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 PRR20EP86478 221 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 PRR20CP86479 221 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 PRR20DP86480 221 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 PRR20BP86481 221 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 PRR20AP86496 221 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms