RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NBR2O15453 112 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 GNG7O60262 68 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 SHANK2-AS3Q9BTD1 123 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 DPM3Q9P2X0 92 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 HLA-DRB1P01911 266 aa10.67□□□□□ -0.7
HERPUD1-204ENST00000439977 SIGLEC15Q6ZMC9 328 aa10.67□□□□□ -0.7
HERPUD1-204ENST00000439977 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
HERPUD1-204ENST00000439977 PSG8Q9UQ74 426 aa10.67□□□□□ -0.7
HERPUD1-204ENST00000439977 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-204ENST00000439977 SMIM12Q96EX1 92 aa10.67□□□□□ -0.7
HERPUD1-204ENST00000439977 TCF21O43680 179 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 FOSL1P15407 271 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 FXYD7P58549 80 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 DYNAPQ8N1N2 210 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 SERTM2A0A1B0GWG4 89 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 SYS1-DBNDD2H3BUS1 97 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 APOHP02749 345 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 NDPQ00604 133 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 CT83Q5H943 113 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 TMEM14CQ9P0S9 112 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 CHD8Q9HCK8 2581 aa10.66□□□□□ -0.7
HERPUD1-204ENST00000439977 LOC389332A0A1B0GUA5 103 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 K7ENP7 123 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 FAM106CPP0CH98 169 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 TCTAP57738 103 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 FAM106AQ4KMX7 169 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 OR2T8A6NH00 312 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 H3BRN7 92 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 ZNF414Q96IQ9 312 aa10.65□□□□□ -0.7
HERPUD1-204ENST00000439977 NCOR2Q9Y618 2525 aa10.65□□□□□ -0.71
HERPUD1-204ENST00000439977 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 OVOL3O00110 214 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 MRPL52Q86TS9 123 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 CFHR4Q92496 578 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 ZFP30Q9Y2G7 519 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 NDUFS7O75251 213 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 PSG3Q16557 428 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 Q8TAT8 98 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 GFRA4Q9GZZ7 299 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 SNAI2O43623 268 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 HLA-DMBP28068 263 aa10.64□□□□□ -0.71
HERPUD1-204ENST00000439977 SPTBN4Q9H254 2564 aa10.63□□□□□ -0.71
HERPUD1-204ENST00000439977 LOC105371242A0A075B767 164 aa10.63□□□□□ -0.71
HERPUD1-204ENST00000439977 HAX1O00165 279 aa10.63□□□□□ -0.71
HERPUD1-204ENST00000439977 C5orf64Q2M2E5 130 aa10.63□□□□□ -0.71
HERPUD1-204ENST00000439977 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
HERPUD1-204ENST00000439977 SOX21Q9Y651 276 aaPredicted RBP10.63□□□□□ -0.71
HERPUD1-204ENST00000439977 K7EQM0 130 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 LY6G5BQ8NDX9 201 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 CHCHD1Q96BP2 118 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 C1RLQ9NZP8 487 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 IGHV3OR16-13A0A075B7E8 117 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 IGHV3-74A0A0B4J1X5 117 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 HOXB4P17483 251 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 NBL1P41271 181 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 LOXL1Q08397 574 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 PRSS3P2Q8NHM4 247 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 NEU4Q8WWR8 484 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 RAB1BQ9H0U4 201 aa10.62□□□□□ -0.71
HERPUD1-204ENST00000439977 F8W735 103 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 MRPS12O15235 138 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 CT45A10P0DMU9 189 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 LYZL1Q6UWQ5 148 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 TIMD4Q96H15 378 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 IGHV3-66A0A0C4DH42 116 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 PAX2Q02962 417 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 GAGE1Q13065 139 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 TMEM75Q8N9X5 138 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 AAMDCQ9H7C9 122 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 NPIPB5A8MRT5 1133 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 MFAP4P55083 255 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 OR11H6Q8NGC7 330 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 RNF5Q99942 180 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 AP5S1Q9NUS5 200 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 C21orf62Q9NYP8 219 aa10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 MRPS16Q9Y3D3 137 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-204ENST00000439977 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 NCR2O95944 276 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 CEACAM3P40198 252 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 RIGQ13278 110 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 FOXE3Q13461 319 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 D6R8Y8 96 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 SMKR1H3BMG3 65 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 CCL25O15444 150 aa10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 ZFP36P26651 326 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-204ENST00000439977 NUDT3O95989 172 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms