RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 NOXRED1Q6NXP6 359 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 TMEM91Q6ZNR0 172 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 SDIM1Q6ZPB5 146 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 TMEM136Q6ZRR5 245 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 TEN1Q86WV5 123 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 ATOH7Q8N100 152 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 KCNRGQ8N5I3 272 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 LINC00311Q8N616 119 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 COPS9Q8WXC6 57 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 SMDT1Q9H4I9 107 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 ASF1BQ9NVP2 202 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 TAS2R8Q9NYW2 309 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 FANCD2Q9BXW9 1451 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 ATG2BQ96BY7 2078 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 TARBP1Q13395 1621 aaKnown RBP2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 NUP205Q92621 2012 aa2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 MED1Q15648 1581 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P45-201ENST00000435986 PZPP20742 1482 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 MYOM2P54296 1465 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 A0A0J9YW62 118 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 C19orf71A6NCJ1 209 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 H3BQ85 93 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 SYNGR2O43760 224 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 CREBL2O60519 120 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 TNFP01375 233 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 IGHV3-53P01767 116 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 TRGC1P0CF51 173 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 RNASE2P10153 161 aaKnown RBP2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 KRTAP10-8P60410 259 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 KHDC3LQ587J8 217 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 DPPA3Q6W0C5 159 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 SOSTDC1Q6X4U4 206 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 AAED1Q7RTV5 226 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 C4orf33Q8N1A6 199 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 PFN4Q8NHR9 129 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 DPH3Q96FX2 82 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 SAR1AQ9NR31 198 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 RPRMQ9NS64 109 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 SCP2D1Q9UJQ7 156 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 V9GYS6 101 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 MYH11P35749 1972 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 KDM5CP41229 1560 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 PLXND1Q9Y4D7 1925 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 NLRC5Q86WI3 1866 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 CDK5RAP2Q96SN8 1893 aa2.48□□□□□ -2.01
HMGB1P45-201ENST00000435986 TOPBP1Q92547 1522 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 FOCADQ5VW36 1801 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 PNMA8CA0A1B0GUJ8 204 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 M0R129 80 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 MSMBP08118 114 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 TPT1P13693 172 aaKnown RBP2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 NFYAP23511 347 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 CATR1Q13166 79 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 LINC01545Q5VT33 79 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 ZNF660Q6AZW8 331 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 C9orf62Q8N4C0 152 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 FAM216BQ8N7L0 139 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 DIRC1Q969H9 104 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 IMMP2LQ96T52 175 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 NAA60Q9H7X0 242 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 FER1L6Q2WGJ9 1857 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 ZFYVE16Q7Z3T8 1539 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 CLASP1Q7Z460 1538 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 ATAD5Q96QE3 1844 aa2.47□□□□□ -2.01
HMGB1P45-201ENST00000435986 DENND4CQ5VZ89 1909 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 UBR2Q8IWV8 1755 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 A2ML1A8K2U0 1454 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 PRR14LQ5THK1 2151 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 ERCC6L2Q5T890 1561 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 RGS12O14924 1447 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 TRBV20-1A0A075B6N2 111 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 TRAV12-2A0A075B6T6 113 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 IGKV1OR2-108A0A075B7D4 117 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 A0A0D9SG52 128 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 A0A1W2PQD3 144 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 H3BT86 120 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 SDCBPO00560 298 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 PSCAO43653 123 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 KLF7O75840 302 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 IGLV6-57P01721 117 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 BRS3P32247 399 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 XCL1P47992 114 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 DYNLT1P63172 113 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 MRPS36P82909 103 aaKnown RBP2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 KLRD1Q13241 179 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 CLLU1Q5K131 121 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 MRPL54Q6P161 138 aaKnown RBP2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 C2orf91Q6ZV80 131 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 C5orf17Q8NAS9 161 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 MUC7Q8TAX7 377 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 METTL1Q9UBP6 276 aaKnown RBP2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 DNAJC15Q9Y5T4 150 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 DLC1Q96QB1 1528 aa2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 KTN1Q86UP2 1357 aaKnown RBP2.46□□□□□ -2.02
HMGB1P45-201ENST00000435986 PIK3C2AO00443 1686 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 MYH7P12883 1935 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 IGHV3-15A0A0B4J1V0 119 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms