RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SCP2D1Q9UJQ7 156 aa8.04□□□□□ -1.12
CHRNA1-207ENST00000435083 CTDSPLO15194 276 aa8.03□□□□□ -1.12
CHRNA1-207ENST00000435083 M6PRP20645 277 aa8.03□□□□□ -1.12
CHRNA1-207ENST00000435083 INPP1P49441 399 aa8.03□□□□□ -1.12
CHRNA1-207ENST00000435083 AKR1C1Q04828 323 aa8.03□□□□□ -1.12
CHRNA1-207ENST00000435083 ESRGQ1W209 222 aa8.03□□□□□ -1.12
CHRNA1-207ENST00000435083 ZNF493Q6ZR52 646 aa8.03□□□□□ -1.12
CHRNA1-207ENST00000435083 LRRC20Q8TCA0 184 aa8.03□□□□□ -1.12
CHRNA1-207ENST00000435083 A0A1W2PPQ1 181 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 ANKRD20A5PA0PJZ0 165 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 H3BRN7 92 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 WRBO00258 174 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 PITX3O75364 302 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 MED6O75586 246 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 RAP2BP61225 183 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 RPP30P78346 268 aaKnown RBP8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 PSG3Q16557 428 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 RNASE8Q8TDE3 154 aaKnown RBP8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 TMEM263Q8WUH6 116 aaKnown RBP8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 UPK3BQ9BT76 320 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 MCUBQ9NWR8 336 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 MRPS16Q9Y3D3 137 aaKnown RBP8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 DNAH5Q8TE73 4624 aa8.02□□□□□ -1.13
CHRNA1-207ENST00000435083 GAGE12BA1L429 117 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 PRSS46E5RG02 174 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 ADAP1O75689 374 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 GAGE7O76087 117 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 PTTG1O95997 202 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 GAGE12FP0CL80 117 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 GAGE12GP0CL81 117 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 GAGE12IP0CL82 117 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 IL7P13232 177 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 RPL7P18124 248 aaKnown RBP8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 CXCL3P19876 107 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 CDKN1BP46527 198 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 CIB3Q96Q77 187 aaPredicted RBP8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 SDHCQ99643 169 aaPredicted RBP8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 SHANK2-AS3Q9BTD1 123 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 HIGD1AQ9Y241 93 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 H7BYZ3 331 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 IL5P05113 134 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 OR5G3P0C626 314 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 HOXA5P20719 270 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 FUSP35637 526 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 AP3S2P59780 193 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 SPANXN5Q5MJ07 72 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 CYP2G1PQ6ZSU1 146 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 CCDC28AQ8IWP9 274 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 DEDD2Q8WXF8 326 aa8.01□□□□□ -1.13
CHRNA1-207ENST00000435083 PIGBOS1A0A0B4J2F0 54 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 DUXBA0A1W2PPF3 345 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 SMCO3A2RU48 225 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 SYNGR2O43760 224 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 HYPMO75409 117 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 RLN2P04090 185 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 LINC00315P59091 139 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 ASAH1Q13510 395 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 BAK1Q16611 211 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 MZT2BQ6NZ67 158 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 ACOT7LQ6ZUV0 252 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 TMED4Q7Z7H5 227 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 LYPD1Q8N2G4 141 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 RPUSD4Q96CM3 377 aaKnown RBP8□□□□□ -1.13
CHRNA1-207ENST00000435083 PGPEP1Q9NXJ5 209 aa8□□□□□ -1.13
CHRNA1-207ENST00000435083 HERC1Q15751 4861 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 A0A087X0K7 114 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 CENPXA8MT69 81 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 SNURFLB1AK76 121 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 H3BP45 60 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 SLC25A6P12236 298 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 VAMP1P23763 118 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 IFITM3Q01628 133 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 KIR3DS1Q14943 382 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 PARD6GQ9BYG4 376 aaPredicted RBP7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 STRAPQ9Y3F4 350 aaKnown RBP7.99□□□□□ -1.13
CHRNA1-207ENST00000435083 H3BNG1 76 aa7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 EREGO14944 169 aa7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 LINC00869P0C866 280 aa7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 ANXA7P20073 488 aaKnown RBP7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 TOMM5Q8N4H5 51 aa7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 FRZBQ92765 325 aa7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 TRIM63Q969Q1 353 aa7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 C20orf144Q9BQM9 153 aa7.98□□□□□ -1.13
CHRNA1-207ENST00000435083 J3KRW8 73 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 SNRPCP09234 159 aaKnown RBP7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 FAUP35544 74 aaKnown RBP7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 XGP55808 180 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 TMEM128Q5BJH2 165 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 Q5VSD8 79 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 S100A7AQ86SG5 101 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 PMS2P5A8MQ11 134 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 SIVA1O15304 175 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 LYRM1O43325 122 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 HOXB5P09067 269 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 PLP1P60201 277 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 ERVFC1-1P60608 527 aa7.97□□□□□ -1.13
CHRNA1-207ENST00000435083 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms