RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ZNF586Q9NXT0 402 aa17.46■□□□□ 0.39
SMARCAL1-208ENST00000434435 NOTCH3Q9UM47 2321 aa17.46■□□□□ 0.38
SMARCAL1-208ENST00000434435 DNASE2O00115 360 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-208ENST00000434435 WIPF1O43516 503 aa17.45■□□□□ 0.38
SMARCAL1-208ENST00000434435 SNRPCP09234 159 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-208ENST00000434435 BLNKQ8WV28 456 aa17.45■□□□□ 0.38
SMARCAL1-208ENST00000434435 SPAG8Q99932 426 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-208ENST00000434435 TRAV2A0A0B4J234 112 aa17.44■□□□□ 0.38
SMARCAL1-208ENST00000434435 IZUMO1RA6ND01 250 aa17.44■□□□□ 0.38
SMARCAL1-208ENST00000434435 H3BTX0 84 aa17.44■□□□□ 0.38
SMARCAL1-208ENST00000434435 PDE6HQ13956 83 aa17.44■□□□□ 0.38
SMARCAL1-208ENST00000434435 GUCA2BQ16661 112 aa17.44■□□□□ 0.38
SMARCAL1-208ENST00000434435 SAMD13Q5VXD3 122 aa17.44■□□□□ 0.38
SMARCAL1-208ENST00000434435 TRBV19A0A075B6N1 114 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 TFPI2P48307 235 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 PSMB3P49720 205 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 RAB14P61106 215 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 WFDC3Q8IUB2 231 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 SUN5Q8TC36 379 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 C17orf77Q96MU5 243 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 SLC50A1Q9BRV3 221 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 TMPRSS5Q9H3S3 457 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 SORL1Q92673 2214 aa17.43■□□□□ 0.38
SMARCAL1-208ENST00000434435 OR4C46A6NHA9 309 aa17.42■□□□□ 0.38
SMARCAL1-208ENST00000434435 ZNF253O75346 499 aa17.42■□□□□ 0.38
SMARCAL1-208ENST00000434435 NMBP08949 121 aa17.42■□□□□ 0.38
SMARCAL1-208ENST00000434435 DCANP1Q8TF63 244 aa17.42■□□□□ 0.38
SMARCAL1-208ENST00000434435 PCNPQ8WW12 178 aaKnown RBP17.42■□□□□ 0.38
SMARCAL1-208ENST00000434435 CMYA5Q8N3K9 4069 aa17.42■□□□□ 0.38
SMARCAL1-208ENST00000434435 K7EQG2 157 aa17.41■□□□□ 0.38
SMARCAL1-208ENST00000434435 SLC17A3O00476 420 aa17.41■□□□□ 0.38
SMARCAL1-208ENST00000434435 PPT1P50897 306 aa17.41■□□□□ 0.38
SMARCAL1-208ENST00000434435 OXLD1Q5BKU9 147 aa17.41■□□□□ 0.38
SMARCAL1-208ENST00000434435 C16orf92Q96LL3 132 aa17.41■□□□□ 0.38
SMARCAL1-208ENST00000434435 SOCS3O14543 225 aa17.4■□□□□ 0.38
SMARCAL1-208ENST00000434435 RGS13O14921 159 aa17.4■□□□□ 0.38
SMARCAL1-208ENST00000434435 LYPD6BQ8NI32 183 aa17.4■□□□□ 0.38
SMARCAL1-208ENST00000434435 ZNF331Q9NQX6 463 aaPredicted RBP17.4■□□□□ 0.38
SMARCAL1-208ENST00000434435 PKD1L1Q8TDX9 2849 aa17.39■□□□□ 0.38
SMARCAL1-208ENST00000434435 ISLRO14498 428 aa17.39■□□□□ 0.37
SMARCAL1-208ENST00000434435 NDUFB4O95168 129 aa17.39■□□□□ 0.37
SMARCAL1-208ENST00000434435 ID1P41134 155 aa17.39■□□□□ 0.37
SMARCAL1-208ENST00000434435 PSG9Q00887 426 aa17.39■□□□□ 0.37
SMARCAL1-208ENST00000434435 CCL20P78556 96 aa17.38■□□□□ 0.37
SMARCAL1-208ENST00000434435 LYPD1Q8N2G4 141 aa17.38■□□□□ 0.37
SMARCAL1-208ENST00000434435 AAMDCQ9H7C9 122 aa17.38■□□□□ 0.37
SMARCAL1-208ENST00000434435 MANBALQ9NQG1 85 aa17.38■□□□□ 0.37
SMARCAL1-208ENST00000434435 GNG13Q9P2W3 67 aa17.38■□□□□ 0.37
SMARCAL1-208ENST00000434435 ZNF256Q9Y2P7 627 aaPredicted RBP17.38■□□□□ 0.37
SMARCAL1-208ENST00000434435 ARL2-SNX15V9GYD0 113 aa17.38■□□□□ 0.37
SMARCAL1-208ENST00000434435 IFNA1P01562 189 aa17.37■□□□□ 0.37
SMARCAL1-208ENST00000434435 UBE2G2P60604 165 aa17.37■□□□□ 0.37
SMARCAL1-208ENST00000434435 SNRPD3P62318 126 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-208ENST00000434435 RANP62826 216 aaKnown RBP17.37■□□□□ 0.37
SMARCAL1-208ENST00000434435 CLLU1Q5K131 121 aa17.37■□□□□ 0.37
SMARCAL1-208ENST00000434435 Q9H3A6 140 aa17.37■□□□□ 0.37
SMARCAL1-208ENST00000434435 CLEC5AQ9NY25 188 aa17.37■□□□□ 0.37
SMARCAL1-208ENST00000434435 TRAV8-2A0A0B4J237 113 aa17.36■□□□□ 0.37
SMARCAL1-208ENST00000434435 A0A1W2PRE2 83 aa17.36■□□□□ 0.37
SMARCAL1-208ENST00000434435 ZNF688P0C7X2 276 aa17.36■□□□□ 0.37
SMARCAL1-208ENST00000434435 BEAN1Q3B7T3 259 aa17.36■□□□□ 0.37
SMARCAL1-208ENST00000434435 FAM24BQ8N5W8 94 aa17.36■□□□□ 0.37
SMARCAL1-208ENST00000434435 ZMAT5Q9UDW3 170 aaKnown RBP17.36■□□□□ 0.37
SMARCAL1-208ENST00000434435 G3V4G9 280 aa17.35■□□□□ 0.37
SMARCAL1-208ENST00000434435 SAMD5Q5TGI4 173 aa17.35■□□□□ 0.37
SMARCAL1-208ENST00000434435 IGFL4Q6B9Z1 124 aa17.35■□□□□ 0.37
SMARCAL1-208ENST00000434435 EXOC3-AS1Q8N2X6 119 aa17.35■□□□□ 0.37
SMARCAL1-208ENST00000434435 OTORQ9NRC9 128 aa17.35■□□□□ 0.37
SMARCAL1-208ENST00000434435 PRELID1Q9Y255 219 aa17.35■□□□□ 0.37
SMARCAL1-208ENST00000434435 FAM74A7A6NL05 159 aa17.34■□□□□ 0.37
SMARCAL1-208ENST00000434435 PAGE4O60829 102 aa17.34■□□□□ 0.37
SMARCAL1-208ENST00000434435 PMS2P11Q13670 270 aa17.34■□□□□ 0.37
SMARCAL1-208ENST00000434435 ICAM4Q14773 271 aa17.34■□□□□ 0.37
SMARCAL1-208ENST00000434435 RNF182Q8N6D2 247 aa17.34■□□□□ 0.37
SMARCAL1-208ENST00000434435 LINC00052Q96N35 136 aa17.34■□□□□ 0.37
SMARCAL1-208ENST00000434435 YTHDF2Q9Y5A9 579 aaKnown RBP17.34■□□□□ 0.37
SMARCAL1-208ENST00000434435 PGPA6NDG6 321 aa17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 HLA-DMBP28068 263 aa17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 CMC4P56277 68 aaPredicted RBP17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 EGFEM1PQ0D2K5 195 aa17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 PSG3Q16557 428 aa17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 PSMG4Q5JS54 123 aa17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 CST9LP1Q5W188 147 aa17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 NKX6-2Q9C056 277 aaPredicted RBP17.33■□□□□ 0.36
SMARCAL1-208ENST00000434435 GGTLC3B5MD39 225 aa17.32■□□□□ 0.36
SMARCAL1-208ENST00000434435 TAGLN2P37802 199 aaKnown RBP17.32■□□□□ 0.36
SMARCAL1-208ENST00000434435 GTSCR1Q86UQ5 136 aa17.32■□□□□ 0.36
SMARCAL1-208ENST00000434435 ZNF738Q8NE65 137 aa17.32■□□□□ 0.36
SMARCAL1-208ENST00000434435 MRPL53Q96EL3 112 aaKnown RBP17.32■□□□□ 0.36
SMARCAL1-208ENST00000434435 C20orf173Q96LM9 149 aa17.32■□□□□ 0.36
SMARCAL1-208ENST00000434435 MAP6D1Q9H9H5 199 aa17.32■□□□□ 0.36
SMARCAL1-208ENST00000434435 BCL2P10415 239 aa17.31■□□□□ 0.36
SMARCAL1-208ENST00000434435 HAGHQ16775 308 aa17.31■□□□□ 0.36
SMARCAL1-208ENST00000434435 SLC25A5P05141 298 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-208ENST00000434435 CSN1S1P47710 185 aa17.3■□□□□ 0.36
SMARCAL1-208ENST00000434435 DEFB131AP59861 70 aa17.3■□□□□ 0.36
SMARCAL1-208ENST00000434435 CD81P60033 236 aa17.3■□□□□ 0.36
SMARCAL1-208ENST00000434435 SUMO1P63165 101 aaKnown RBP17.3■□□□□ 0.36
SMARCAL1-208ENST00000434435 ODF3L2Q3SX64 289 aa17.3■□□□□ 0.36
SMARCAL1-208ENST00000434435 CMTM2Q8TAZ6 248 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms