RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 WI2-2373I1.2A0A1W2PRP0 233 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 PGPA6NDG6 321 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 OVOL3O00110 214 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 BMPR1BO00238 502 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF253O75346 499 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 SLC25A5P05141 298 aaKnown RBP5.86□□□□□ -1.47
COL17A1-204ENST00000433822 MGST1P10620 155 aaKnown RBP5.86□□□□□ -1.47
COL17A1-204ENST00000433822 PSG1P11464 419 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 ORM2P19652 201 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 CNTFRP26992 372 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 FOXA3P55318 350 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-204ENST00000433822 MMDQ15546 238 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 HCP5Q6MZN7 132 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF600Q6ZNG1 722 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 C19orf35Q6ZS72 473 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 COX8CQ7Z4L0 72 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 TMEM256Q8N2U0 113 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF664Q8N3J9 261 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 TTC9CQ8N5M4 171 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 TMEM75Q8N9X5 138 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 GATD1Q8NB37 220 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 NUDT10Q8NFP7 164 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 NUDT11Q96G61 164 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 C14orf144Q96I85 54 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 KCNS1Q96KK3 526 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 RNASE7Q9H1E1 156 aaKnown RBP5.86□□□□□ -1.47
COL17A1-204ENST00000433822 Q9H3A6 140 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 RPP21Q9H633 154 aaKnown RBP5.86□□□□□ -1.47
COL17A1-204ENST00000433822 THYN1Q9P016 225 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 ONECUT1Q9UBC0 465 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 NAGKQ9UJ70 344 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 ZFP30Q9Y2G7 519 aa5.86□□□□□ -1.47
COL17A1-204ENST00000433822 A0A1B0GW15 77 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 K7EQM0 130 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 MRPS12O15235 138 aaKnown RBP5.85□□□□□ -1.47
COL17A1-204ENST00000433822 PLXNB1O43157 2135 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 SERF1AO75920 110 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 APCSP02743 223 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 GPX1P07203 203 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 RD3LP0DJH9 198 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 IGLC2P0DOY2 106 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 HNF1AP20823 631 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 GNLYP22749 145 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 COX7A1P24310 79 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 RAB9AP51151 201 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 MFAP4P55083 255 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 FXYD3Q14802 87 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 PLGLAQ15195 96 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 C9orf152Q5JTZ5 239 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 LDLRAD2Q5SZI1 272 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 Q6AWC8 147 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 BAGE3Q86Y29 109 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 NUP35Q8NFH5 326 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 OR4F17Q8NGA8 305 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 C2orf88Q9BSF0 95 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 KRTAP3-1Q9BYR8 98 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 SIRPDQ9H106 197 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 GNB4Q9HAV0 340 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF586Q9NXT0 402 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 C1RLQ9NZP8 487 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 ZMAT5Q9UDW3 170 aaKnown RBP5.85□□□□□ -1.47
COL17A1-204ENST00000433822 MAP1AP78559 2803 aaPredicted RBP5.85□□□□□ -1.47
COL17A1-204ENST00000433822 ATRQ13535 2644 aa5.85□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF469Q96JG9 3925 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-204ENST00000433822 TRBV19A0A075B6N1 114 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 HIGD1CA8MV81 97 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 LYNX1G3V0Z9 82 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF324O75467 553 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-204ENST00000433822 NDUFB8O95169 186 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 CNIH1O95406 144 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 HLA-DRB1P01911 266 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 LYNX1P0DP58 116 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 HBBP68871 147 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 RBPMS2Q6ZRY4 209 aaKnown RBP5.84□□□□□ -1.47
COL17A1-204ENST00000433822 Q86TA4 180 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 SIGLECL1Q8N7X8 197 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 ZNF491Q8N8L2 437 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 NHLRC2Q8NBF2 726 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 VN1R17PQ8TDU5 208 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 ARPC1AQ92747 370 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 RNF125Q96EQ8 232 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 STAB1Q9NY15 2570 aa5.84□□□□□ -1.47
COL17A1-204ENST00000433822 IGHV2-70DA0A0C4DH43 119 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 C20orf202A1L168 122 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 GRIFINA4D1Z8 144 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 NUPR1O60356 82 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 IGLV2-11P01706 119 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 P01737 135 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 PMCHP20382 165 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 UBE2E1P51965 193 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 EFNA4P52798 201 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 LYZP61626 148 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 ARF6P62330 175 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 SRSF2Q01130 221 aaKnown RBP5.83□□□□□ -1.48
COL17A1-204ENST00000433822 SIGLEC15Q6ZMC9 328 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 Q6ZWC4 215 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 VMO1Q7Z5L0 202 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 C18orf32Q8TCD1 76 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 DAZAP1Q96EP5 407 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms