RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.32
CHFR-203ENST00000432561 UQCRFS1P47985 274 aa13.02□□□□□ -0.32
CHFR-203ENST00000432561 EBLN2Q6P2I7 272 aa13.02□□□□□ -0.32
CHFR-203ENST00000432561 MIEN1Q9BRT3 115 aa13.02□□□□□ -0.32
CHFR-203ENST00000432561 M0R143 59 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 RAB4AP20338 218 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 ZNF138P52744 262 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 MFAP4P55083 255 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 SPATA45Q537H7 98 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 DTX2Q86UW9 622 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 C21orf62Q9NYP8 219 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 PSG8Q9UQ74 426 aa13.02□□□□□ -0.33
CHFR-203ENST00000432561 CFAP46Q8IYW2 2715 aa13.01□□□□□ -0.33
CHFR-203ENST00000432561 CRIP1P50238 77 aa13.01□□□□□ -0.33
CHFR-203ENST00000432561 BATFQ16520 125 aa13.01□□□□□ -0.33
CHFR-203ENST00000432561 NPIPB6E9PJ23 425 aa13.01□□□□□ -0.33
CHFR-203ENST00000432561 EGR2P11161 476 aaPredicted RBP13.01□□□□□ -0.33
CHFR-203ENST00000432561 KLF5Q13887 457 aaPredicted RBP13.01□□□□□ -0.33
CHFR-203ENST00000432561 LBHQ53QV2 105 aaPredicted RBP13.01□□□□□ -0.33
CHFR-203ENST00000432561 CT83Q5H943 113 aa13.01□□□□□ -0.33
CHFR-203ENST00000432561 CSMD2Q7Z408 3487 aa13□□□□□ -0.33
CHFR-203ENST00000432561 IGHV7-81A0A0B4J1V7 117 aa13□□□□□ -0.33
CHFR-203ENST00000432561 FAM181BA6NEQ2 426 aa13□□□□□ -0.33
CHFR-203ENST00000432561 NPIPB5A8MRT5 1133 aa13□□□□□ -0.33
CHFR-203ENST00000432561 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
CHFR-203ENST00000432561 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
CHFR-203ENST00000432561 SPATA12Q7Z6I5 190 aa13□□□□□ -0.33
CHFR-203ENST00000432561 Q8N6K4 173 aa13□□□□□ -0.33
CHFR-203ENST00000432561 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
CHFR-203ENST00000432561 OVOL3O00110 214 aa13□□□□□ -0.33
CHFR-203ENST00000432561 PSG3Q16557 428 aa13□□□□□ -0.33
CHFR-203ENST00000432561 SIRPDQ9H106 197 aa13□□□□□ -0.33
CHFR-203ENST00000432561 FLNCQ14315 2725 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 C19orf84I3L1E1 186 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 CHEK1O14757 476 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 ECSCRQ19T08 205 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 LINC00173Q6ZV60 143 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 TTC9CQ8N5M4 171 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 UTP20O75691 2785 aaKnown RBP12.99□□□□□ -0.33
CHFR-203ENST00000432561 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
CHFR-203ENST00000432561 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
CHFR-203ENST00000432561 APOHP02749 345 aaPredicted RBP12.99□□□□□ -0.33
CHFR-203ENST00000432561 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 CTRLP40313 264 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 BPESC1Q9GZL8 116 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 C1RLQ9NZP8 487 aa12.99□□□□□ -0.33
CHFR-203ENST00000432561 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 MUC21Q5SSG8 566 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 Q8N9W7 124 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 TMEM75Q8N9X5 138 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 OR4B1Q8NGF8 309 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 CSN3P07498 182 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 CTSGP08311 255 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 GFRA4Q9GZZ7 299 aa12.98□□□□□ -0.33
CHFR-203ENST00000432561 TIMM8BQ9Y5J9 83 aaPredicted RBP12.98□□□□□ -0.33
CHFR-203ENST00000432561 LINC01548A6NM66 108 aa12.97□□□□□ -0.33
CHFR-203ENST00000432561 G0S2P27469 103 aa12.97□□□□□ -0.33
CHFR-203ENST00000432561 IGHV3OR16-10A0A075B7F0 116 aa12.97□□□□□ -0.33
CHFR-203ENST00000432561 SAA4P35542 130 aa12.97□□□□□ -0.33
CHFR-203ENST00000432561 Q8TAT8 98 aa12.97□□□□□ -0.33
CHFR-203ENST00000432561 AJUBAQ96IF1 538 aa12.97□□□□□ -0.33
CHFR-203ENST00000432561 TRAV30A0A087WSZ9 112 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 LOC102724200A0A096LPH7 203 aaPredicted RBP12.96□□□□□ -0.33
CHFR-203ENST00000432561 C2orf70A6NJV1 201 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 TCAPO15273 167 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 GPR183P32249 361 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 K7EQM0 130 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 C16orf54Q6UWD8 224 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 C1orf122Q6ZSJ8 110 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 AAMDCQ9H7C9 122 aa12.96□□□□□ -0.33
CHFR-203ENST00000432561 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 IGHV1-24A0A0C4DH33 117 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 G3V318 75 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 MCRIP2Q9BUT9 160 aaKnown RBP12.95□□□□□ -0.34
CHFR-203ENST00000432561 TP73-AS1Q9UF72 201 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 ZFP30Q9Y2G7 519 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 IGHV2-70DA0A0C4DH43 119 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 ATP6V0E1O15342 81 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 EBI3Q14213 229 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 MINOS1Q5TGZ0 78 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 UNQ5815/PRO19632Q6UWF5 114 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 SMAD5-AS1Q9Y6J3 95 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 MINOS1-NBL1R4GNA1 71 aa12.95□□□□□ -0.34
CHFR-203ENST00000432561 A0A1B0GUT8 65 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 C15orf32Q32M92 178 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 LYPD1Q8N2G4 141 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 THYN1Q9P016 225 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 RNF24Q9Y225 148 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 SOX21Q9Y651 276 aaPredicted RBP12.94□□□□□ -0.34
CHFR-203ENST00000432561 PIEZO1Q92508 2521 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 HAX1O00165 279 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 BTF3P20290 206 aaKnown RBP12.94□□□□□ -0.34
CHFR-203ENST00000432561 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
CHFR-203ENST00000432561 FAM106CPP0CH98 169 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms