RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 COX7A2LO14548 114 aa4.25□□□□□ -1.73
PTPN4-203ENST00000430976 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-203ENST00000430976 DYNLT3P51808 116 aa4.25□□□□□ -1.73
PTPN4-203ENST00000430976 ZNF793Q6ZN11 406 aa4.25□□□□□ -1.73
PTPN4-203ENST00000430976 CD177Q8N6Q3 437 aa4.25□□□□□ -1.73
PTPN4-203ENST00000430976 LYZL4Q96KX0 146 aa4.25□□□□□ -1.73
PTPN4-203ENST00000430976 PRSS27Q9BQR3 290 aa4.25□□□□□ -1.73
PTPN4-203ENST00000430976 TMEM74BQ9NUR3 256 aa4.25□□□□□ -1.73
PTPN4-203ENST00000430976 IGHV5-10-1A0A0J9YXX1 117 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 YPEL3P61236 119 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-203ENST00000430976 GUSBP11Q6P575 273 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 Q96M85 177 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 PIN1P1O15428 100 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 PEBP1P30086 187 aaKnown RBP4.24□□□□□ -1.73
PTPN4-203ENST00000430976 RPL30P62888 115 aaKnown RBP4.24□□□□□ -1.73
PTPN4-203ENST00000430976 PRSS3P2Q8NHM4 247 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 FGFBP3Q8TAT2 258 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 WFDC5Q8TCV5 224 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 WFDC6Q9BQY6 131 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 CELA1Q9UNI1 258 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 AFDNP55196 1824 aaKnown RBP4.24□□□□□ -1.73
PTPN4-203ENST00000430976 MON2Q7Z3U7 1717 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 TRBV6-7A0A0A0MS04 114 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 LINC01549A6NIU2 74 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 E9PLD3 99 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 MFAP2P55001 183 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 C2orf82Q6UX34 121 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 Q8N976 141 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 TMEM133Q9H2Q1 129 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 RFPL3SP0C7P2 107 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 CRYGAP11844 174 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 MP68P56378 58 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 TP53TG3Q9ULZ0 132 aa4.24□□□□□ -1.73
PTPN4-203ENST00000430976 PTPRZ1P23471 2315 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-203ENST00000430976 DSCAML1Q8TD84 2053 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 SCRG1O75711 98 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 PRSS1P07477 247 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 FRMD6-AS1P0C7T7 363 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 LINC00205P59089 165 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-203ENST00000430976 FRG2Q64ET8 278 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 OR10AC1Q8NH08 325 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 FRG2BQ96QU4 278 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 NRKQ7Z2Y5 1582 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 HELZP42694 1942 aaKnown RBP4.23□□□□□ -1.73
PTPN4-203ENST00000430976 MEGF6O75095 1541 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 LOC389332A0A1B0GUA5 103 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 C11orf94C9JXX5 98 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 ITGBL1O95965 494 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-203ENST00000430976 HMGA2P52926 109 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 CCL8P80075 99 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 FXYD3Q14802 87 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 LYZL2Q7Z4W2 148 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 MBD6Q96DN6 1003 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 LINC00474Q9P2X8 69 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 COL14A1Q05707 1796 aaKnown RBP4.23□□□□□ -1.73
PTPN4-203ENST00000430976 PCDH15Q96QU1 1955 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 DSCR4P56555 118 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-203ENST00000430976 FAM57BQ71RH2 274 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 Q8N1Y9 231 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 DAND5Q8N907 189 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 OVOL2Q9BRP0 275 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 OSTCQ9NRP0 149 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 CACNA1AO00555 2505 aa4.23□□□□□ -1.73
PTPN4-203ENST00000430976 CFAP126Q5VTH2 177 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 LHFPL1Q86WI0 220 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 PDPNQ86YL7 162 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 NKAPP1Q8N9T2 125 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 TTTY13Q9BZ97 58 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 ATAD5Q96QE3 1844 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 COL18A1P39060 1754 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 SLC50A1Q9BRV3 221 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 EML6Q6ZMW3 1958 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 C1orf167Q5SNV9 1468 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 MUC4Q99102 2169 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 CXCL8P10145 99 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 ZDBF2Q9HCK1 2354 aa4.22□□□□□ -1.73
PTPN4-203ENST00000430976 SLURP2P0DP57 97 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 SLC25A16P16260 332 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 Q6ZS49 121 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 FAM223AQ8IWN6 122 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 RPP25LQ8N5L8 163 aaKnown RBP4.21□□□□□ -1.73
PTPN4-203ENST00000430976 SERP2Q8N6R1 65 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 ABHD14BQ96IU4 210 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 SMIM14Q96QK8 99 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 IMUPQ9GZP8 106 aa4.21□□□□□ -1.73
PTPN4-203ENST00000430976 LRRC37A3O60309 1634 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 KIAA1551Q9HCM1 1747 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 TRBV19A0A075B6N1 114 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 A0A1B0GXF2 115 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 C17orf51A8MQB3 221 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 WISP2O76076 250 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 MPV17P39210 176 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 LINC00310P59036 64 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 C6orf99Q4VX62 202 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 C2orf91Q6ZV80 131 aa4.21□□□□□ -1.74
PTPN4-203ENST00000430976 IL36RNQ9UBH0 155 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms