RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 WT1P19544 449 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-208ENST00000430669 RPL15P61313 204 aaKnown RBP9.28□□□□□ -0.92
PTCH1-208ENST00000430669 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
PTCH1-208ENST00000430669 H3BRM9 83 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 BEX4Q9NWD9 120 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-208ENST00000430669 FAM90A2PQ658T7 463 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 LINC01587Q99440 93 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 ST20Q9HBF5 79 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF492Q9P255 531 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV3OR16-12A0A075B7B8 117 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 LINC00205P59089 165 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 RAB37Q96AX2 223 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 HOXB4P17483 251 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-208ENST00000430669 TTC9CQ8N5M4 171 aa9.28□□□□□ -0.92
PTCH1-208ENST00000430669 NAV3Q8IVL0 2385 aa9.27□□□□□ -0.92
PTCH1-208ENST00000430669 COX6CP09669 75 aa9.27□□□□□ -0.92
PTCH1-208ENST00000430669 TDGF1P3P51864 188 aa9.27□□□□□ -0.92
PTCH1-208ENST00000430669 NRN1Q9NPD7 142 aa9.27□□□□□ -0.93
PTCH1-208ENST00000430669 C7orf71A4D174 169 aa9.27□□□□□ -0.93
PTCH1-208ENST00000430669 TMEM50AO95807 157 aa9.27□□□□□ -0.93
PTCH1-208ENST00000430669 IGKV3-20P01619 116 aa9.27□□□□□ -0.93
PTCH1-208ENST00000430669 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-208ENST00000430669 SMPXQ9UHP9 88 aa9.27□□□□□ -0.93
PTCH1-208ENST00000430669 CSPG4Q6UVK1 2322 aa9.27□□□□□ -0.93
PTCH1-208ENST00000430669 CXCL1P09341 107 aa9.27□□□□□ -0.93
PTCH1-208ENST00000430669 DMRTC2Q8IXT2 367 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-208ENST00000430669 LAGE3Q14657 143 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 NIT1Q86X76 327 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 NPBQ8NG41 125 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-208ENST00000430669 OR11H12B2RN74 326 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-208ENST00000430669 SP5Q6BEB4 398 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-208ENST00000430669 OR11H1Q8NG94 326 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 OR11H2Q8NH07 326 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 HIST1H2BLQ99880 126 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 FSTL3O95633 263 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 HIST3H2BBQ8N257 126 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 DERL1Q9BUN8 251 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 Q86TA4 180 aa9.26□□□□□ -0.93
PTCH1-208ENST00000430669 FGF23Q9GZV9 251 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-208ENST00000430669 GSN-AS1Q9NRJ2 163 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 CEP350Q5VT06 3117 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 NDUFA4O00483 81 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 LY6HO94772 140 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 TMEM160Q9NX00 188 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 ATP6V0E1O15342 81 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 CIDEAO60543 219 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 ZNF415Q09FC8 603 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 SEM1Q6ZVN7 128 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 C1QTNF4Q9BXJ3 329 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 PRDM13Q9H4Q3 707 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 CYSLTR1Q9Y271 337 aa9.25□□□□□ -0.93
PTCH1-208ENST00000430669 BRD3OSQ6XYD6 125 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 FAM231DQ6ZW35 169 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 IGHV3OR16-8A0A075B7F1 116 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 SH2D1AO60880 128 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 Q5PR19 223 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 H3BRN7 92 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 TCF21O43680 179 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 IFI27P40305 119 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-208ENST00000430669 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 INS-IGF2F8WCM5 200 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 AMBPP02760 352 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 MRAP2Q96G30 205 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 SPOCK3Q9BQ16 436 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 DPM2O94777 84 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 WT1-ASQ06250 92 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 COTL1Q14019 142 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 MS4A6AQ9H2W1 248 aa9.24□□□□□ -0.93
PTCH1-208ENST00000430669 SRSF2Q01130 221 aaKnown RBP9.23□□□□□ -0.93
PTCH1-208ENST00000430669 DUX4L9Q6RFH8 374 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-208ENST00000430669 RNF114Q9Y508 228 aa9.23□□□□□ -0.93
PTCH1-208ENST00000430669 ZNF25P17030 456 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-208ENST00000430669 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
PTCH1-208ENST00000430669 IGFBPL1Q8WX77 278 aa9.23□□□□□ -0.93
PTCH1-208ENST00000430669 SSBP4Q9BWG4 385 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-208ENST00000430669 PIEZO2Q9H5I5 2752 aa9.23□□□□□ -0.93
PTCH1-208ENST00000430669 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
PTCH1-208ENST00000430669 TCTAP57738 103 aa9.23□□□□□ -0.93
PTCH1-208ENST00000430669 DAZAP2Q15038 168 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-208ENST00000430669 KLK15Q9H2R5 256 aa9.23□□□□□ -0.93
PTCH1-208ENST00000430669 C11orf52Q96A22 123 aa9.23□□□□□ -0.93
PTCH1-208ENST00000430669 TRBV19A0A075B6N1 114 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 TRAV9-2A0A087WT02 112 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 ZNRD1Q9P1U0 126 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 SMIM27A0A1W2PRY6 76 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 CNTFRP26992 372 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 ATP6V0BQ99437 205 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 LINC00574Q9H8X3 128 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 MMP23AO75900 390 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 INSP01308 110 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 LHFPL4Q7Z7J7 247 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 FOXC2Q99958 501 aa9.22□□□□□ -0.93
PTCH1-208ENST00000430669 HIVEP3Q5T1R4 2406 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms