RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PRR27Q6MZM9 219 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 GFRALQ6UXV0 394 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 Q6ZN92 141 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 C8orf86Q6ZUL3 223 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 PPP1R27Q86WC6 154 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 LPAR2Q9HBW0 351 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 CTSZQ9UBR2 303 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 HEATR1Q9H583 2144 aaKnown RBP6.92□□□□□ -1.3
GABPB1-205ENST00000429662 DSCAMO60469 2012 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 TRAV30A0A087WSZ9 112 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 IGHV1-3A0A0C4DH29 117 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 SERTM2A0A1B0GWG4 89 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 FBLL1A6NHQ2 334 aaKnown RBP6.92□□□□□ -1.3
GABPB1-205ENST00000429662 BUB1B-PAK6H3BSN5 160 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 CRXO43186 299 aaPredicted RBP6.92□□□□□ -1.3
GABPB1-205ENST00000429662 FCN3O75636 299 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 IGLV1-47P01700 117 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 G0S2P27469 103 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 S100A7P31151 101 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 CAMPP49913 170 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 GNG5P63218 68 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 RIGQ13278 110 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 DIAPH2-AS1Q14236 149 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 GDF5OSQ5U4N7 250 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 HCP5Q6MZN7 132 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 RNASEKQ6P5S7 137 aaKnown RBP6.92□□□□□ -1.3
GABPB1-205ENST00000429662 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 C11orf42Q8N5U0 333 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 ARL6IP6Q8N6S5 226 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 TMEM75Q8N9X5 138 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 GATD1Q8NB37 220 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 BLNKQ8WV28 456 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 FOXC2Q99958 501 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 RASL11BQ9BPW5 248 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 ST20Q9HBF5 79 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 MRPL36Q9P0J6 103 aaKnown RBP6.92□□□□□ -1.3
GABPB1-205ENST00000429662 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
GABPB1-205ENST00000429662 DYSFO75923 2080 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 TGP01266 2768 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 SHISA9B4DS77 424 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 TEX22C9J3V5 150 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 E7EQL1 145 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 CHEK1O14757 476 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 LIPFP07098 398 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 CD3EP07766 207 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 IGLC1P0CG04 106 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 ZNF841Q6ZN19 808 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 Q71RC1 249 aaPredicted RBP6.91□□□□□ -1.3
GABPB1-205ENST00000429662 Q86TA4 180 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 BPIFA4PQ86YQ2 179 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 FAM19A2Q8N3H0 131 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 OR4F17Q8NGA8 305 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 RPEQ96AT9 228 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 SLC25A39Q9BZJ4 359 aaPredicted RBP6.91□□□□□ -1.3
GABPB1-205ENST00000429662 RAB1BQ9H0U4 201 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 RNF114Q9Y508 228 aa6.91□□□□□ -1.3
GABPB1-205ENST00000429662 RAI1Q7Z5J4 1906 aaPredicted RBP6.9□□□□□ -1.3
GABPB1-205ENST00000429662 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.9□□□□□ -1.31
GABPB1-205ENST00000429662 C2orf70A6NJV1 201 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 I3L2K1 104 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 SCGB2A1O75556 95 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 PLAUP00749 431 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 PSG1P11464 419 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 TSPOP30536 169 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 LYZP61626 148 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 PET117Q6UWS5 81 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 OR2D3Q8NGH3 330 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 SRSF12Q8WXF0 261 aaKnown RBP6.9□□□□□ -1.31
GABPB1-205ENST00000429662 RITA1Q96K30 269 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 ZNF48Q96MX3 618 aaPredicted RBP6.9□□□□□ -1.31
GABPB1-205ENST00000429662 SHANK2-AS3Q9BTD1 123 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 TMEM191AQ9H0A3 160 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 HSPB8Q9UJY1 196 aa6.9□□□□□ -1.31
GABPB1-205ENST00000429662 SONP18583 2426 aaKnown RBP6.9□□□□□ -1.31
GABPB1-205ENST00000429662 LOC102724200A0A096LPH7 203 aaPredicted RBP6.89□□□□□ -1.31
GABPB1-205ENST00000429662 PPIAL4CA0A0B4J2A2 164 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 HSBP1L1C9JCN9 74 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 LY6LH3BQJ8 138 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 H3BRN7 92 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 IGHV3-48P01763 117 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 PPIAL4GP0DN37 164 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 COL8A2P25067 703 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 CEACAM3P40198 252 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 PDE6HQ13956 83 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 BATFQ16520 125 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 EBLN2Q6P2I7 272 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 TCF24Q7RTU0 167 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 GTSF1Q8WW33 167 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 VKORC1Q9BQB6 163 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 WNT10AQ9GZT5 417 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 MS4A6AQ9H2W1 248 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 RPH3ALQ9UNE2 315 aa6.89□□□□□ -1.31
GABPB1-205ENST00000429662 PKD1L1Q8TDX9 2849 aa6.88□□□□□ -1.31
GABPB1-205ENST00000429662 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms