RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 IGHV4-30-4P0DP06 118 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 PYYP10082 97 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
VARS2-203ENST00000428017 UBE2L3P68036 154 aaKnown RBP11.28□□□□□ -0.6
VARS2-203ENST00000428017 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 RPP25LQ8N5L8 163 aaKnown RBP11.28□□□□□ -0.6
VARS2-203ENST00000428017 FAM167A-AS1Q96KT0 104 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 WFDC10AQ9H1F0 79 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 H3BQ15 152 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 H3BTX0 84 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 SOCS3O14543 225 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 BLNKQ8WV28 456 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 RNF141Q8WVD5 230 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 TMED6Q8WW62 240 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 C19orf73Q9NVV2 129 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.61
VARS2-203ENST00000428017 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
VARS2-203ENST00000428017 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.61
VARS2-203ENST00000428017 OR10J4P0C629 311 aa11.26□□□□□ -0.61
VARS2-203ENST00000428017 PSG9Q00887 426 aa11.26□□□□□ -0.61
VARS2-203ENST00000428017 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
VARS2-203ENST00000428017 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
VARS2-203ENST00000428017 CLEC5AQ9NY25 188 aa11.26□□□□□ -0.61
VARS2-203ENST00000428017 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 CTXND1A0A1B0GTU2 59 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 ZNF253O75346 499 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 NBEAP1P0C6P0 100 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 PDE6HQ13956 83 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 IGFL4Q6B9Z1 124 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 STHQ8IWL8 128 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 IQCF2Q8IXL9 164 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 RNF182Q8N6D2 247 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 FXYD5Q96DB9 178 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 AAMDCQ9H7C9 122 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 ZNF331Q9NQX6 463 aaPredicted RBP11.25□□□□□ -0.61
VARS2-203ENST00000428017 SORL1Q92673 2214 aa11.25□□□□□ -0.61
VARS2-203ENST00000428017 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 A8MZ25 164 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 CXorf1O96002 111 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 FRMD6-AS1P0C7T7 363 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 STAG3L2P0CL84 134 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 STAG3L3P0CL85 134 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 ZNF124Q15973 351 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 EBLN2Q6P2I7 272 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 DPPA3Q6W0C5 159 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 ZNF738Q8NE65 137 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 FAM213BQ8TBF2 198 aa11.24□□□□□ -0.61
VARS2-203ENST00000428017 LOC102724200A0A096LPH7 203 aaPredicted RBP11.23□□□□□ -0.61
VARS2-203ENST00000428017 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
VARS2-203ENST00000428017 BOLA2-SMG1P6H3BVE0 249 aa11.23□□□□□ -0.61
VARS2-203ENST00000428017 SLC17A3O00476 420 aa11.23□□□□□ -0.61
VARS2-203ENST00000428017 RAB5CP51148 216 aa11.23□□□□□ -0.61
VARS2-203ENST00000428017 PSG3Q16557 428 aa11.23□□□□□ -0.61
VARS2-203ENST00000428017 FOXI2Q6ZQN5 318 aa11.23□□□□□ -0.61
VARS2-203ENST00000428017 SAT2Q96F10 170 aaPredicted RBP11.23□□□□□ -0.61
VARS2-203ENST00000428017 ZNF503Q96F45 646 aa11.23□□□□□ -0.61
VARS2-203ENST00000428017 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
VARS2-203ENST00000428017 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
VARS2-203ENST00000428017 RANP62826 216 aaKnown RBP11.22□□□□□ -0.61
VARS2-203ENST00000428017 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
VARS2-203ENST00000428017 CITED4Q96RK1 184 aa11.22□□□□□ -0.61
VARS2-203ENST00000428017 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
VARS2-203ENST00000428017 TMEM167BQ9NRX6 74 aa11.22□□□□□ -0.61
VARS2-203ENST00000428017 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
VARS2-203ENST00000428017 FBN3Q75N90 2809 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 NDUFB4O95168 129 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 HLA-DMBP28068 263 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 GCHFRP30047 84 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 FHITP49789 147 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 APOC4P55056 127 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 ZNF726P1Q15940 193 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 SSX7Q7RTT5 188 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
VARS2-203ENST00000428017 PHYHIPLQ96FC7 376 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
VARS2-203ENST00000428017 PRELID1Q9Y255 219 aa11.21□□□□□ -0.61
VARS2-203ENST00000428017 RBMY1BA6NDE4 496 aaKnown RBP11.2□□□□□ -0.62
VARS2-203ENST00000428017 RBMY1EA6NEQ0 496 aaKnown RBP11.2□□□□□ -0.62
VARS2-203ENST00000428017 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
VARS2-203ENST00000428017 RBMY1DP0C7P1 496 aaKnown RBP11.2□□□□□ -0.62
VARS2-203ENST00000428017 HLA-DRB4P13762 266 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 CSN1S1P47710 185 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 ICAM4Q14773 271 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 FAM74A1Q5RGS3 127 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 LYPD1Q8N2G4 141 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 EXOC3-AS1Q8N2X6 119 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 SFT2D1Q8WV19 159 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 MRPL53Q96EL3 112 aaKnown RBP11.2□□□□□ -0.62
VARS2-203ENST00000428017 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 CMYA5Q8N3K9 4069 aa11.2□□□□□ -0.62
VARS2-203ENST00000428017 F6UB75 175 aa11.19□□□□□ -0.62
VARS2-203ENST00000428017 TEX46H3BTG2 121 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms