RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 IGFBPL1Q8WX77 278 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 F11RQ9Y624 299 aaKnown RBP8.59□□□□□ -1.03
TCOF1-204ENST00000427724 COX11Q9Y6N1 276 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 LOC389332A0A1B0GUA5 103 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 UPK2O00526 184 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 MGPP08493 103 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 RAB9AP51151 201 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 DTX2Q86UW9 622 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 Q8TCH9 128 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 WFDC12Q8WWY7 111 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 LINC01587Q99440 93 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 G3V318 75 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 KRTAP10-9P60411 292 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
TCOF1-204ENST00000427724 SLC25A48Q6ZT89 311 aaKnown RBP8.59□□□□□ -1.03
TCOF1-204ENST00000427724 C5orf17Q8NAS9 161 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 ITGB1BP1O14713 200 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 FABP2P12104 132 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 SPATA31B1PQ5VZV4 182 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 CRIP3Q6Q6R5 217 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 IFI27L2Q9H2X8 130 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 H3BUT2 72 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 CIDEAO60543 219 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 HLA-DRB1P01911 266 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 GCSHP23434 173 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 C22orf34Q6ZV56 151 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 WDR86Q86TI4 376 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 OR10W1Q8NGF6 305 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 NUPR1O60356 82 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 ERVK11-1P61568 191 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 PGLYRP4Q96LB8 373 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 DUX3Q96PT4 197 aa8.58□□□□□ -1.04
TCOF1-204ENST00000427724 LY6G6DO95868 133 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 PRB4P10163 310 aaPredicted RBP8.57□□□□□ -1.04
TCOF1-204ENST00000427724 CDSNQ15517 529 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 AGMATQ9BSE5 352 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 SEPSECSQ9HD40 501 aaKnown RBP8.57□□□□□ -1.04
TCOF1-204ENST00000427724 VPREB3Q9UKI3 123 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 SIGLEC9Q9Y336 463 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 C15orf62A8K5M9 175 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 PRSS1P07477 247 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 OR11H1Q8NG94 326 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 TRGV2A0A075B6R0 118 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 KIR2DL5BA0A0G2JN68 375 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 KIR2DL5BA0A0G2JPC4 375 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 C9JCJ5 164 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 CCL25O15444 150 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 SPRNQ5BIV9 151 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 SAMD13Q5VXD3 122 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 KIR2DL5AQ8N109 375 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 OR1N2Q8NGR9 330 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 CTSZQ9UBR2 303 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 OVOL3O00110 214 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 CST9LQ9H4G1 147 aa8.57□□□□□ -1.04
TCOF1-204ENST00000427724 MBNL3Q9NUK0 354 aaKnown RBP8.57□□□□□ -1.04
TCOF1-204ENST00000427724 USP24Q9UPU5 2620 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 ZNF688P0C7X2 276 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 IGLC2P0DOY2 106 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 IGLC3P0DOY3 106 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 LINC00305Q7Z4B0 112 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 MRPL52Q86TS9 123 aaKnown RBP8.56□□□□□ -1.04
TCOF1-204ENST00000427724 C15orf61A6NNL5 157 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 STAG3L2P0CL84 134 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 STAG3L3P0CL85 134 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 TMEM95Q3KNT9 176 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 OCIAD2Q56VL3 154 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 MGST2Q99735 147 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 C7orf71A4D174 169 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 ATP6V0E1O15342 81 aa8.56□□□□□ -1.04
TCOF1-204ENST00000427724 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 A8MWL6 223 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 PSMG4Q5JS54 123 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 Q6ZPA2 131 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 Q6ZSR3 168 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 TMEM167AQ8TBQ9 72 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 SMR3AQ99954 134 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 MCRIP2Q9BUT9 160 aaKnown RBP8.55□□□□□ -1.04
TCOF1-204ENST00000427724 A0A1B0GV72 72 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 hDV102S1A0JD36 115 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 F2Z2F3 143 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 MMP23AO75900 390 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.55□□□□□ -1.04
TCOF1-204ENST00000427724 MUC21A0A0G2JKD1 596 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 MUC21A0A140T8X8 626 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.55□□□□□ -1.04
TCOF1-204ENST00000427724 NDPQ00604 133 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
TCOF1-204ENST00000427724 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
TCOF1-204ENST00000427724 LOXL1Q08397 574 aaPredicted RBP8.54□□□□□ -1.04
TCOF1-204ENST00000427724 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 GOLT1AQ6ZVE7 132 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 TMEM144Q7Z5S9 345 aa8.54□□□□□ -1.04
TCOF1-204ENST00000427724 ZNF114Q8NC26 417 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms