RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 S100A7P31151 101 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 ZNF266Q14584 549 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 ICAM4Q14773 271 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 SPATA31B1PQ5VZV4 182 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 RPL7L1Q6DKI1 246 aaKnown RBP5.49□□□□□ -1.53
LINC01049-201ENST00000426840 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 S100A7AQ86SG5 101 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 GPR82Q96P67 336 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 MAP6D1Q9H9H5 199 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 SEPSECSQ9HD40 501 aaKnown RBP5.49□□□□□ -1.53
LINC01049-201ENST00000426840 NRN1Q9NPD7 142 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 TIMM9Q9Y5J7 89 aa5.49□□□□□ -1.53
LINC01049-201ENST00000426840 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
LINC01049-201ENST00000426840 RBMY1BA6NDE4 496 aaKnown RBP5.48□□□□□ -1.53
LINC01049-201ENST00000426840 RBMY1EA6NEQ0 496 aaKnown RBP5.48□□□□□ -1.53
LINC01049-201ENST00000426840 TAAR5O14804 337 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 RBMY1DP0C7P1 496 aaKnown RBP5.48□□□□□ -1.53
LINC01049-201ENST00000426840 FRMD6-AS1P0C7T7 363 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 ZNF688P0C7X2 276 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 RPL7P18124 248 aaKnown RBP5.48□□□□□ -1.53
LINC01049-201ENST00000426840 ATP6V0CP27449 155 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 GALR1P47211 349 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 DEFB131AP59861 70 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 CD300CQ08708 224 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 FFAR4Q5NUL3 377 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 FAM78BQ5VT40 261 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 MIR17HGQ75NE6 70 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 AKAP14Q86UN6 197 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 APRG1Q8IVJ8 170 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 HSD17B11Q8NBQ5 300 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 FAM167A-AS1Q96KT0 104 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 PFDN5Q99471 154 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 SRD5A3Q9H8P0 318 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 KCNIP2Q9NS61 270 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 RNF24Q9Y225 148 aa5.48□□□□□ -1.53
LINC01049-201ENST00000426840 AGRNO00468 2067 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 MEGF8Q7Z7M0 2845 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 A0A087X0K7 114 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 BORCS7-ASMTA0A0B4J1R7 106 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 TRAV8-2A0A0B4J237 113 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 A0A0D9SG52 128 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 H3BQ15 152 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 JTBO76095 146 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 C1QBP02746 253 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 MEOX2P50222 304 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 ZNF345Q14585 488 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 LGALSLQ3ZCW2 172 aaPredicted RBP5.47□□□□□ -1.53
LINC01049-201ENST00000426840 TMUB2Q71RG4 321 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 BPIFA4PQ86YQ2 179 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 SBSPONQ8IVN8 264 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 OR2G3Q8NGZ4 309 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 SAT2Q96F10 170 aaPredicted RBP5.47□□□□□ -1.53
LINC01049-201ENST00000426840 ASCL2Q99929 193 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 B9D2Q9BPU9 175 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 PSMG3Q9BT73 122 aaPredicted RBP5.47□□□□□ -1.53
LINC01049-201ENST00000426840 SH3BGRL3Q9H299 93 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 TUBA4BQ9H853 241 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 TMEM14CQ9P0S9 112 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 FUT9Q9Y231 359 aa5.47□□□□□ -1.53
LINC01049-201ENST00000426840 ISLRO14498 428 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 SNRPCP09234 159 aaKnown RBP5.46□□□□□ -1.54
LINC01049-201ENST00000426840 IGLC2P0DOY2 106 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 HIST1H1EP10412 219 aaKnown RBP5.46□□□□□ -1.54
LINC01049-201ENST00000426840 M6PRP20645 277 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 ID1P41134 155 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 DEFB1P60022 68 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 RAB2AP61019 212 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 SERF2P84101 59 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 HAGHQ16775 308 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 ACOT6Q3I5F7 207 aaPredicted RBP5.46□□□□□ -1.54
LINC01049-201ENST00000426840 PSMG4Q5JS54 123 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 IGFL4Q6B9Z1 124 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 GNPNAT1Q96EK6 184 aaPredicted RBP5.46□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF503Q96F45 646 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 HYLS1Q96M11 299 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 ARPC5LQ9BPX5 153 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 SLC25A2Q9BXI2 301 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 MRPL32Q9BYC8 188 aaKnown RBP5.46□□□□□ -1.54
LINC01049-201ENST00000426840 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 ZNF586Q9NXT0 402 aa5.46□□□□□ -1.54
LINC01049-201ENST00000426840 LOC102724200A0A096LPH7 203 aaPredicted RBP5.45□□□□□ -1.54
LINC01049-201ENST00000426840 KNCNA6PVL3 124 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 H3BTX0 84 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 EIF3GO75821 320 aaKnown RBP eCLIP5.45□□□□□ -1.54
LINC01049-201ENST00000426840 NDUFB4O95168 129 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 PYYP10082 97 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 SPP1P10451 314 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 HLA-DMBP28068 263 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 PSMB3P49720 205 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 SNRPD3P62318 126 aaKnown RBP5.45□□□□□ -1.54
LINC01049-201ENST00000426840 RHOBP62745 196 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 SAMD13Q5VXD3 122 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 RPP25LQ8N5L8 163 aaKnown RBP5.45□□□□□ -1.54
LINC01049-201ENST00000426840 OR10G4Q8NGN3 311 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 OR10G9Q8NGN4 311 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 OR10G7Q8NGN6 311 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 LINC00052Q96N35 136 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
LINC01049-201ENST00000426840 OR51M1Q9H341 326 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms