RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 CTSGP08311 255 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 C3orf79P0CE67 100 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 ZNF705DP0CH99 300 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 ZNF705BP0CI00 300 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 PMCHP20382 165 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 SAA4P35542 130 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 CSN1S1P47710 185 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 SSTP61278 116 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 SRSF2Q01130 221 aaKnown RBP3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 PMCHL1Q16048 86 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 Q56UQ5 140 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 SAPCD1Q5SSQ6 148 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 ZNF493Q6ZR52 646 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 TCF24Q7RTU0 167 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 PRNTQ86SH4 94 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 OR2D3Q8NGH3 330 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 ZNF502Q8TBZ5 544 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 ZC2HC1AQ96GY0 325 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 ZFAND3Q9H8U3 227 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 RABAC1Q9UI14 185 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 RPH3ALQ9UNE2 315 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 ABCA1O95477 2261 aa3.78□□□□□ -1.8
CKS1BP6-201ENST00000424932 LRBAP50851 2863 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 SPTBN1Q01082 2364 aaKnown RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 DCHS1Q96JQ0 3298 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 WNK2Q9Y3S1 2297 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 CENPVL3A0A0U1RRI6 287 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 RBAKDNA6NC62 111 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 TMEM8BA6NDV4 472 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 FAM181BA6NEQ2 426 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 C2orf70A6NJV1 201 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 NCBP2LA6PVI3 153 aaKnown RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 M0R143 59 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 NDUFS8O00217 210 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 CHEK1O14757 476 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 EREGO14944 169 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 NPFFO15130 113 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 SNRPCP09234 159 aaKnown RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 OR5AL1P0C617 328 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 CT45A10P0DMU9 189 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 BTF3P20290 206 aaKnown RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 CD24P25063 80 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 CAMPP49913 170 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 RPS20P60866 119 aaKnown RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 KRTDAPP60985 99 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 RIGQ13278 110 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 C19orf54Q5BKX5 351 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 KLF17Q5JT82 389 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 FAM120AOSQ5T036 256 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 C5orf56Q8N8D9 126 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 BORCS7Q96B45 105 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 MRPL53Q96EL3 112 aaKnown RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 URB1-AS1Q96HZ7 61 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 PGLYRP4Q96LB8 373 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 SGK494Q96LW2 274 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 C17orf77Q96MU5 243 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 SSBP4Q9BWG4 385 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 SNHG12Q9BXW3 62 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 CNFNQ9BYD5 112 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 UBTD1Q9HAC8 227 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 ZZEF1O43149 2961 aa3.77□□□□□ -1.81
CKS1BP6-201ENST00000424932 TRBV7-1A0A0A6YYK4 115 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 A0A1B0GV90 55 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 OR2T8A6NH00 312 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 FAM223BA6NKX1 122 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 M0R2Z0 102 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 M0R3E3 92 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 ATP6V0E1O15342 81 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 BUB3O43684 328 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 NDUFS7O75251 213 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 IGHG4P01861 327 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 CD33P20138 364 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 CRIP1P50238 77 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 NUTF2P61970 127 aaKnown RBP3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 RHOGP84095 191 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 PAX8Q06710 450 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 LY6DQ14210 128 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 C15orf32Q32M92 178 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 TDRG1Q3Y452 100 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 RNASEKQ6P5S7 137 aaKnown RBP3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 UNQ5815/PRO19632Q6UWF5 114 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 FAM223AQ8IWN6 122 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 BCL6BQ8N143 479 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 KLHDC1Q8N7A1 406 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 CCDC140Q96MF4 163 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 PSMG3-AS1Q96PY0 264 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 PRR25Q96S07 402 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 SLC50A1Q9BRV3 221 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 BPESC1Q9GZL8 116 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 HIF1ANQ9NWT6 349 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 PPP1R14DQ9NXH3 145 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 CLEC5AQ9NY25 188 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 UQCR10Q9UDW1 63 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 ZNF580Q9UK33 172 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 PAM16Q9Y3D7 125 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 SMAD5-AS1Q9Y6J3 95 aa3.76□□□□□ -1.81
CKS1BP6-201ENST00000424932 U3KQE9 123 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms