RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 NDUFB4O95168 129 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 ZNF705DP0CH99 300 aaPredicted RBP10.1□□□□□ -0.79
PRPF39-202ENST00000424478 ZNF705BP0CI00 300 aaPredicted RBP10.1□□□□□ -0.79
PRPF39-202ENST00000424478 RAB14P61106 215 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 CST9LP1Q5W188 147 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 SGK494Q96LW2 274 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 MS4A6AQ9H2W1 248 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 A0A1W2PS18 150 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 RGS13O14921 159 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
PRPF39-202ENST00000424478 GNG5P63218 68 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 FAM90A2PQ658T7 463 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 GRAMD2BQ96HH9 432 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 WFDC10AQ9H1F0 79 aa10.1□□□□□ -0.79
PRPF39-202ENST00000424478 ZNF688P0C7X2 276 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 BLOC1S1P78537 153 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 TOR2AQ5JU69 321 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 DPPA3Q6W0C5 159 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 PQLC2Q6ZP29 291 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 RBPMS2Q6ZRY4 209 aaKnown RBP10.09□□□□□ -0.79
PRPF39-202ENST00000424478 SLC7A5P1Q8MH63 180 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 SAT2Q96F10 170 aaPredicted RBP10.09□□□□□ -0.79
PRPF39-202ENST00000424478 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 LINC00052Q96N35 136 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 F6UB75 175 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 GALR1P47211 349 aa10.09□□□□□ -0.79
PRPF39-202ENST00000424478 TRBV19A0A075B6N1 114 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 GGTLC3B5MD39 225 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 CEBPGP53567 150 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 ICAM4Q14773 271 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 TRAV8-2A0A0B4J237 113 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 DNASE2O00115 360 aaPredicted RBP10.08□□□□□ -0.8
PRPF39-202ENST00000424478 HIST1H1EP10412 219 aaKnown RBP10.08□□□□□ -0.8
PRPF39-202ENST00000424478 SUMO1P63165 101 aaKnown RBP10.08□□□□□ -0.8
PRPF39-202ENST00000424478 CLLU1Q5K131 121 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 RXFP4Q8TDU9 374 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 C16orf92Q96LL3 132 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 NRN1Q9NPD7 142 aa10.08□□□□□ -0.8
PRPF39-202ENST00000424478 C9JQL5 133 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 PRAC2D3DTV9 90 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 G3V4G9 280 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 DCANP1Q8TF63 244 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 Q9H3A6 140 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 PGPA6NDG6 321 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 IGLV1-51P01701 117 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 PRB2P02812 416 aaPredicted RBP10.07□□□□□ -0.8
PRPF39-202ENST00000424478 LINC00479Q96M42 142 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 EIF5A2Q9GZV4 153 aaKnown RBP10.07□□□□□ -0.8
PRPF39-202ENST00000424478 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 PFDN2Q9UHV9 154 aa10.07□□□□□ -0.8
PRPF39-202ENST00000424478 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
PRPF39-202ENST00000424478 CD7P09564 240 aa10.06□□□□□ -0.8
PRPF39-202ENST00000424478 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
PRPF39-202ENST00000424478 LYPD6BQ8NI32 183 aa10.06□□□□□ -0.8
PRPF39-202ENST00000424478 MARC2Q969Z3 335 aa10.06□□□□□ -0.8
PRPF39-202ENST00000424478 PSMG4Q5JS54 123 aa10.06□□□□□ -0.8
PRPF39-202ENST00000424478 ZNF331Q9NQX6 463 aaPredicted RBP10.06□□□□□ -0.8
PRPF39-202ENST00000424478 HELTA6NFD8 242 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 HBE1P02100 147 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 SOCS3O14543 225 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 WFDC9Q8NEX5 89 aa10.05□□□□□ -0.8
PRPF39-202ENST00000424478 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-202ENST00000424478 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-202ENST00000424478 GUK1Q16774 197 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 DERL1Q9BUN8 251 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 TMEM167BQ9NRX6 74 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 TRAV34A0A0B4J273 112 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 SCO2A0A1W2PP80 73 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 RBFOX3A6NFN3 312 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 C11orf94C9JXX5 98 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 COMMD7Q86VX2 200 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-202ENST00000424478 SLC25A5P05141 298 aaKnown RBP10.04□□□□□ -0.8
PRPF39-202ENST00000424478 BCL2P10415 239 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 CD81P60033 236 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 PRR25Q96S07 402 aa10.04□□□□□ -0.8
PRPF39-202ENST00000424478 K7EQG2 157 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 TSPAN4O14817 238 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 PSMB3P49720 205 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 DEFB131AP59861 70 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 C9orf66Q5T8R8 295 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 CITED4Q96RK1 184 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 BMI1P35226 326 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 ERCC8Q13216 396 aa10.03□□□□□ -0.8
PRPF39-202ENST00000424478 LOC102723971A0A1B0GUV8 181 aa10.02□□□□□ -0.8
PRPF39-202ENST00000424478 KRTAP10-11P60412 298 aa10.02□□□□□ -0.8
PRPF39-202ENST00000424478 ZNF738Q8NE65 137 aa10.02□□□□□ -0.8
PRPF39-202ENST00000424478 GPR82Q96P67 336 aa10.02□□□□□ -0.8
PRPF39-202ENST00000424478 A0A087X0K7 114 aa10.02□□□□□ -0.81
PRPF39-202ENST00000424478 ODF3L2Q3SX64 289 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms