RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SPINK8P0C7L1 97 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 HLA-DRB4P13762 266 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 MZT1Q08AG7 82 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 C12orf74Q32Q52 190 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 TPPP3Q9BW30 176 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 HLA-DRB4X5D2U9 266 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 AGRNO00468 2067 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 ZNF292O60281 2723 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 LYZL6O75951 148 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 APOMO95445 188 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 TAL2Q16559 108 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 SAP25Q8TEE9 199 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 TRGV9Q99603 122 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 RELNP78509 3460 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 K7EMI3 77 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 EVI2AP22794 236 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 FOXI1Q12951 378 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 MRPL51Q4U2R6 128 aaKnown RBP6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 SYT8Q8NBV8 401 aa6.37□□□□□ -1.39
HMGXB4-202ENST00000418170 A0A1B0GWB2 263 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 LCNL1Q6ZST4 164 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 WFDC3Q8IUB2 231 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 EXOC3-AS1Q8N2X6 119 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 ATP6V0E2Q8NHE4 81 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 C8orf46Q8TAG6 207 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 C1QTNF4Q9BXJ3 329 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 PRR14LQ5THK1 2151 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 ARFGEF3Q5TH69 2177 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 TMEM213A2RRL7 107 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 KLRC4-KLRK1H3BQV0 150 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 IGKV3-15P01624 115 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 CRYGCP07315 174 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 CRIP1P50238 77 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 RRN3P1Q2M238 152 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 RUSC1-AS1Q66K80 236 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 Q6ZS92 163 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 TMEM75Q8N9X5 138 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 OR10X1Q8NGY0 326 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 TMEM167AQ8TBQ9 72 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 NPYP01303 97 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 IGKCP01834 107 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 C10orf55Q5SWW7 151 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 ZNF71Q9NQZ8 489 aaPredicted RBP6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 ZNRD1Q9P1U0 126 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 PRRG2O14669 202 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 KLF17Q5JT82 389 aaPredicted RBP6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 PGPEP1Q9NXJ5 209 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 TMEM14CQ9P0S9 112 aa6.36□□□□□ -1.39
HMGXB4-202ENST00000418170 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 THBDP07204 575 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 MBNL2Q5VZF2 373 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 ZNF833PQ6ZTB9 187 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 TMEM190Q8WZ59 177 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 LINC00574Q9H8X3 128 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 MRPS17Q9Y2R5 130 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 ZZEF1O43149 2961 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 GATA3P23771 443 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 Q6ZUT4 128 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 RNF183Q96D59 192 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 MRPL20Q9BYC9 149 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 RPUSD1Q9UJJ7 312 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 PSG8Q9UQ74 426 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 SVILO95425 2214 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 LINC01546A6NGU7 62 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 CKS2P33552 79 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 TMEM30BQ3MIR4 351 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 ZC2HC1BQ5TFG8 222 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 GTSCR1Q86UQ5 136 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 TMEM178AQ8NBL3 297 aa6.35□□□□□ -1.39
HMGXB4-202ENST00000418170 TNFRSF1AP19438 455 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 XGP55808 180 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 FHL3Q13643 280 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 LINC01559Q495D7 138 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 HIGD1AQ9Y241 93 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 DPM2O94777 84 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 LHBP01229 141 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 CFAP126Q5VTH2 177 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 ASCL2Q99929 193 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 A0A1W2PPI3 338 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 SMKR1H3BMG3 65 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 NTN3O00634 580 aaPredicted RBP6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 CECR9P0C854 216 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 PPIFP30405 207 aaKnown RBP6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 PEAR1Q5VY43 1037 aaPredicted RBP6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 PVRIGQ6DKI7 326 aa6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 DUX4L9Q6RFH8 374 aaPredicted RBP6.34□□□□□ -1.39
HMGXB4-202ENST00000418170 PLXNB1O43157 2135 aa6.34□□□□□ -1.4
HMGXB4-202ENST00000418170 ZFHX3Q15911 3703 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 PRSS1P07477 247 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 FCER1GP30273 86 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 NFE4Q86UQ8 179 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 SLC25A39Q9BZJ4 359 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 RAI1Q7Z5J4 1906 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 SMCPP49901 116 aaPredicted RBP6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 CCL11P51671 97 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 SPRNQ5BIV9 151 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms