RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 IL5P05113 134 aa10.61□□□□□ -0.71
DDX56-202ENST00000415758 RAP2BP61225 183 aa10.61□□□□□ -0.71
DDX56-202ENST00000415758 AKR1C1Q04828 323 aa10.61□□□□□ -0.71
DDX56-202ENST00000415758 CYP2G1PQ6ZSU1 146 aa10.61□□□□□ -0.71
DDX56-202ENST00000415758 ZNF586Q9NXT0 402 aa10.61□□□□□ -0.71
DDX56-202ENST00000415758 A0A0J9YY99 117 aa10.6□□□□□ -0.71
DDX56-202ENST00000415758 SELENOTP62341 195 aa10.6□□□□□ -0.71
DDX56-202ENST00000415758 SPANXN5Q5MJ07 72 aa10.6□□□□□ -0.71
DDX56-202ENST00000415758 LYPD1Q8N2G4 141 aa10.6□□□□□ -0.71
DDX56-202ENST00000415758 RPUSD4Q96CM3 377 aaKnown RBP10.6□□□□□ -0.71
DDX56-202ENST00000415758 RSL24D1Q9UHA3 163 aaKnown RBP10.6□□□□□ -0.71
DDX56-202ENST00000415758 MRPS12O15235 138 aaKnown RBP10.59□□□□□ -0.71
DDX56-202ENST00000415758 INAFM2P0DMQ5 153 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 CXCL2P19875 107 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 XGP55808 180 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 LINC00315P59091 139 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 DLK1P80370 383 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 C4orf46Q504U0 113 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 S100A7AQ86SG5 101 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 CCDC28AQ8IWP9 274 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 LRRC20Q8TCA0 184 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 SOSTQ9BQB4 213 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 RNF24Q9Y225 148 aa10.59□□□□□ -0.71
DDX56-202ENST00000415758 STRAPQ9Y3F4 350 aaKnown RBP10.59□□□□□ -0.71
DDX56-202ENST00000415758 GAGE12BA1L429 117 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 GAGE7O76087 117 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 RLN2P04090 185 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 LINC00869P0C866 280 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 GAGE12FP0CL80 117 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 GAGE12GP0CL81 117 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 GAGE12IP0CL82 117 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 SPCS2Q15005 226 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 TMED4Q7Z7H5 227 aa10.58□□□□□ -0.72
DDX56-202ENST00000415758 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
DDX56-202ENST00000415758 PMS2P5A8MQ11 134 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 H3BP45 60 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 K7EPK0 472 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 OR5G3P0C626 314 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 SMIM18P0DKX4 95 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 VAMP1P23763 118 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 ID3Q02535 119 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 DAZ2Q13117 558 aaKnown RBP10.57□□□□□ -0.72
DDX56-202ENST00000415758 CDPF1Q6NVV7 123 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 PATE2Q6UY27 113 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 VSIG2Q96IQ7 327 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 C18orf15Q96N68 181 aa10.57□□□□□ -0.72
DDX56-202ENST00000415758 A0A096LPF7 62 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 SNURFLB1AK76 121 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 SFT2D2O95562 160 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 FAUP35544 74 aaKnown RBP10.56□□□□□ -0.72
DDX56-202ENST00000415758 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 LCN15Q6UWW0 184 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 SLC50A1Q9BRV3 221 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 PTTG2Q9NZH5 202 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 FAT1Q14517 4588 aa10.56□□□□□ -0.72
DDX56-202ENST00000415758 FNDC10F2Z333 226 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 PRB4P10163 310 aaPredicted RBP10.55□□□□□ -0.72
DDX56-202ENST00000415758 ANXA7P20073 488 aaKnown RBP10.55□□□□□ -0.72
DDX56-202ENST00000415758 PXDC1Q5TGL8 231 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 CCDC190Q86UF4 302 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 DYNC2LI1Q8TCX1 351 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 SLC25A21Q9BQT8 299 aaPredicted RBP10.55□□□□□ -0.72
DDX56-202ENST00000415758 ARL6Q9H0F7 186 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 ARV1Q9H2C2 271 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 TMPRSS5Q9H3S3 457 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 NPVFQ9HCQ7 196 aa10.55□□□□□ -0.72
DDX56-202ENST00000415758 CCDC59Q9P031 241 aaKnown RBP10.55□□□□□ -0.72
DDX56-202ENST00000415758 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
DDX56-202ENST00000415758 EREGO14944 169 aa10.54□□□□□ -0.72
DDX56-202ENST00000415758 SIVA1O15304 175 aa10.54□□□□□ -0.72
DDX56-202ENST00000415758 HOXB5P09067 269 aa10.54□□□□□ -0.72
DDX56-202ENST00000415758 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
DDX56-202ENST00000415758 ZBTB8BQ8NAP8 495 aaPredicted RBP10.54□□□□□ -0.72
DDX56-202ENST00000415758 ODF3Q96PU9 254 aa10.54□□□□□ -0.72
DDX56-202ENST00000415758 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
DDX56-202ENST00000415758 PARD6GQ9BYG4 376 aaPredicted RBP10.54□□□□□ -0.72
DDX56-202ENST00000415758 MYCBP2O75592 4640 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 FABP12A6NFH5 140 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 PRAC2D3DTV9 90 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 TNFSF8P32971 234 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 POLR2GP62487 172 aaKnown RBP eCLIP10.53□□□□□ -0.72
DDX56-202ENST00000415758 Q5VSD8 79 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 TEPPQ6URK8 271 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 Q6ZTI0 123 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 FRZBQ92765 325 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 SMIM8Q96KF7 97 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 PSENENQ9NZ42 101 aa10.53□□□□□ -0.72
DDX56-202ENST00000415758 AP3S2P59780 193 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 ERVFC1-1P60608 527 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 TMEM14EPQ6UXP3 125 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 LINC00305Q7Z4B0 112 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 BPIFA4PQ86YQ2 179 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 ZNF431Q8TF32 576 aaPredicted RBP10.52□□□□□ -0.73
DDX56-202ENST00000415758 DEDD2Q8WXF8 326 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 TRIM63Q969Q1 353 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 SAT2Q96F10 170 aaPredicted RBP10.52□□□□□ -0.73
DDX56-202ENST00000415758 VPS13BQ7Z7G8 4022 aa10.52□□□□□ -0.73
DDX56-202ENST00000415758 TRAV12-3A0A0B4J271 114 aa10.51□□□□□ -0.73
DDX56-202ENST00000415758 CT45A10P0DMU9 189 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms