RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 DSCR8Q96T75 97 aa15.05■□□□□ -0
SHANK3-202ENST00000414786 KIAA1551Q9HCM1 1747 aa15.05■□□□□ -0
SHANK3-202ENST00000414786 CACNA1BQ00975 2339 aa15.04■□□□□ -0
SHANK3-202ENST00000414786 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.04■□□□□ -02e-6■■■□□ 16.6
SHANK3-202ENST00000414786 C5orf64Q2M2E5 130 aa15.04■□□□□ -0
SHANK3-202ENST00000414786 IGLV10-54A0A075B6I4 117 aa15.04■□□□□ -0
SHANK3-202ENST00000414786 DEFB136Q30KP8 78 aa15.04■□□□□ -0
SHANK3-202ENST00000414786 PSG3Q16557 428 aa15.04■□□□□ -0
SHANK3-202ENST00000414786 TRBV6-7A0A0A0MS04 114 aa15.04■□□□□ -0
SHANK3-202ENST00000414786 NDUFS8O00217 210 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 CSRP1P21291 193 aaKnown RBP15.03■□□□□ -0
SHANK3-202ENST00000414786 NHSQ6T4R5 1651 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 ATP6V0E1O15342 81 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 ATRAIDQ6UW56 229 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 SPINK8P0C7L1 97 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 STRCQ7RTU9 1775 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 HGFACQ04756 655 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 TP53TG1Q9Y2A0 90 aa15.03■□□□□ -0
SHANK3-202ENST00000414786 ARMS2P0C7Q2 107 aa15.02■□□□□ -0
SHANK3-202ENST00000414786 TSKUQ8WUA8 353 aa15.02■□□□□ -0
SHANK3-202ENST00000414786 BCORQ6W2J9 1755 aa15.02■□□□□ -0
SHANK3-202ENST00000414786 RPP25LQ8N5L8 163 aaKnown RBP15.02■□□□□ -0
SHANK3-202ENST00000414786 MGST2Q99735 147 aa15.02■□□□□ -0
SHANK3-202ENST00000414786 SOCS3O14543 225 aa15.02□□□□□ -0.01
SHANK3-202ENST00000414786 NOP10Q9NPE3 64 aaKnown RBP15.02□□□□□ -0.01
SHANK3-202ENST00000414786 ZNF883P0CG24 379 aa15.02□□□□□ -0.01
SHANK3-202ENST00000414786 MPV17L2Q567V2 206 aa15.02□□□□□ -0.01
SHANK3-202ENST00000414786 IGKV1D-12P01611 117 aa15.02□□□□□ -0.01
SHANK3-202ENST00000414786 WFDC1Q9HC57 220 aa15.02□□□□□ -0.01
SHANK3-202ENST00000414786 DAZ1Q9NQZ3 744 aaKnown RBP15.02□□□□□ -0.01
SHANK3-202ENST00000414786 PPBPP02775 128 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 PRSS57Q6UWY2 283 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 NOTCH3Q9UM47 2321 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 ATAD5Q96QE3 1844 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 CD5P06127 495 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 NRXN3Q9Y4C0 1643 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 LY6G5BQ8NDX9 201 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 ARAP2Q8WZ64 1704 aa15.01□□□□□ -0.01
SHANK3-202ENST00000414786 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
SHANK3-202ENST00000414786 STPG4Q8N801 248 aa15□□□□□ -0.01
SHANK3-202ENST00000414786 A0A1B0GWJ7 208 aa15□□□□□ -0.01
SHANK3-202ENST00000414786 LINC00479Q96M42 142 aa15□□□□□ -0.01
SHANK3-202ENST00000414786 IGKV1D-8A0A087WSZ0 117 aa15□□□□□ -0.01
SHANK3-202ENST00000414786 C4orf48Q5BLP8 95 aa15□□□□□ -0.01
SHANK3-202ENST00000414786 DEFB4AO15263 64 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 RMI2Q96E14 147 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 CHAC1Q9BUX1 264 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 KMT2EQ8IZD2 1858 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 FAM223BA6NKX1 122 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 E7EQL1 145 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 FAM223AQ8IWN6 122 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 CITED1Q99966 193 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 SIGLEC9Q9Y336 463 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 H0YJW9 148 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 USMG5Q96IX5 58 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 A0A0A6YYD4 124 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 MRPL14Q6P1L8 145 aaKnown RBP14.99□□□□□ -0.01
SHANK3-202ENST00000414786 TREML4Q6UXN2 200 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 ZNF236Q9UL36 1845 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 IGHG4P01861 327 aa14.99□□□□□ -0.01
SHANK3-202ENST00000414786 BUB3O43684 328 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 NBL1P41271 181 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 HSD52Q0P140 79 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 TMEM243Q9BU79 118 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 LAMB2P55268 1798 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 NUP35Q8NFH5 326 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 TMEM213A2RRL7 107 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 F8W735 103 aaPredicted RBP14.98□□□□□ -0.01
SHANK3-202ENST00000414786 SPRY2O43597 315 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 C9orf153Q5TBE3 101 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 RNASE2P10153 161 aaKnown RBP14.98□□□□□ -0.01
SHANK3-202ENST00000414786 GAFA1Q96PS6 74 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 MINOS1Q5TGZ0 78 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 MINOS1-NBL1R4GNA1 71 aa14.98□□□□□ -0.01
SHANK3-202ENST00000414786 C9orf139Q6ZV77 190 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 C14orf132Q9NPU4 83 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 DOCK8Q8NF50 2099 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 SPATA25Q9BR10 227 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 ZNF503Q96F45 646 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 SLC25A48Q6ZT89 311 aaKnown RBP14.97□□□□□ -0.01
SHANK3-202ENST00000414786 WFDC11Q8NEX6 87 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 CHCHD1Q96BP2 118 aaKnown RBP14.97□□□□□ -0.01
SHANK3-202ENST00000414786 HLA-DRB4P13762 266 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 MRPL52Q86TS9 123 aaKnown RBP14.97□□□□□ -0.01
SHANK3-202ENST00000414786 HLA-DRB4X5D2U9 266 aa14.97□□□□□ -0.01
SHANK3-202ENST00000414786 A0A1W2PPI3 338 aa14.96□□□□□ -0.01
SHANK3-202ENST00000414786 MST1P26927 711 aa14.96□□□□□ -0.01
SHANK3-202ENST00000414786 RPRMLQ8N4K4 120 aa14.96□□□□□ -0.01
SHANK3-202ENST00000414786 SHISA3A0PJX4 238 aa14.96□□□□□ -0.01
SHANK3-202ENST00000414786 TIRAPP58753 221 aa14.96□□□□□ -0.01
SHANK3-202ENST00000414786 TMEM170AQ8WVE7 144 aa14.96□□□□□ -0.01
SHANK3-202ENST00000414786 OSTCQ9NRP0 149 aa14.96□□□□□ -0.01
SHANK3-202ENST00000414786 TRPT1Q86TN4 253 aaKnown RBP14.96□□□□□ -0.01
SHANK3-202ENST00000414786 IGKV1-9A0A0C4DH69 117 aa14.96□□□□□ -0.02
SHANK3-202ENST00000414786 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
SHANK3-202ENST00000414786 ARTNQ5T4W7 220 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 APRG1Q8IVJ8 170 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 TRACP01848 142 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 FAM120AOSQ5T036 256 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 EGR2P11161 476 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms