RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 I3L2K1 104 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
SHMT2-202ENST00000414700 CFHR3Q02985 330 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 BAGE2Q86Y30 109 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 Q8N2B8 174 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 MRPL18Q9H0U6 180 aaKnown RBP12.1□□□□□ -0.47
SHMT2-202ENST00000414700 KCNIP2Q9NS61 270 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 LAMTOR2Q9Y2Q5 125 aa12.1□□□□□ -0.47
SHMT2-202ENST00000414700 IGKV1OR2-108A0A075B7D4 117 aa12.09□□□□□ -0.47
SHMT2-202ENST00000414700 DIRC3C9JPN6 131 aa12.09□□□□□ -0.47
SHMT2-202ENST00000414700 UBE2V1Q13404 147 aa12.09□□□□□ -0.47
SHMT2-202ENST00000414700 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
SHMT2-202ENST00000414700 OR2D3Q8NGH3 330 aa12.09□□□□□ -0.47
SHMT2-202ENST00000414700 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 IGLC3P0DOY3 106 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 CBLN1P23435 193 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 KLK15Q9H2R5 256 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 TRBV9A0A0B4J1U6 114 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 IGHV3-23P01764 117 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 KRTDAPP60985 99 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 Q6ZN92 141 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 TXN2Q99757 166 aa12.08□□□□□ -0.48
SHMT2-202ENST00000414700 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-202ENST00000414700 ATRQ13535 2644 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 CORTO00230 105 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 HYPMO75409 117 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 NDUFB4O95168 129 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 CDC34P49427 236 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-202ENST00000414700 RHOGP84095 191 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 CACNG8Q8WXS5 425 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
SHMT2-202ENST00000414700 IGLV1-40P01703 118 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 ATP5G3P48201 142 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 ZNF90Q03938 601 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 ZNF738Q8NE65 137 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 OR1L6Q8NGR2 347 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 DERL1Q9BUN8 251 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 NPCDR1Q9BY65 106 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 WDR83OSQ9Y284 106 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 RNF114Q9Y508 228 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 COX11Q9Y6N1 276 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 GPX1P07203 203 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 JMJD8Q96S16 334 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 NPVFQ9HCQ7 196 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
SHMT2-202ENST00000414700 LSM4Q9Y4Z0 139 aaKnown RBP12.06□□□□□ -0.48
SHMT2-202ENST00000414700 F2Z2F3 143 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 C17orf112F2Z3M2 114 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 F8W735 103 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-202ENST00000414700 TRGV3P03979 118 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 UBE2G2P60604 165 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 KLHDC1Q8N7A1 406 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 MGST2Q99735 147 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 TXNDC17Q9BRA2 123 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 KLK9Q9UKQ9 250 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
SHMT2-202ENST00000414700 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 ZNF253O75346 499 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 IGHG4P01861 327 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 PPBPP02775 128 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 PF4V1P10720 104 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 HIST2H2BDQ6DRA6 164 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 ETFRF1Q6IPR1 90 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 THYN1Q9P016 225 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 MRPS16Q9Y3D3 137 aaKnown RBP12.04□□□□□ -0.48
SHMT2-202ENST00000414700 IGKV1D-37A0A075B6S9 117 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 PSMB8P28062 276 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 TEPPQ6URK8 271 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 NRN1Q9NPD7 142 aa12.04□□□□□ -0.48
SHMT2-202ENST00000414700 PSMB11A5LHX3 300 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 FNDC10F2Z333 226 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 GATA2P23769 480 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-202ENST00000414700 RAB9AP51151 201 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 TRBV20OR9-2A0A075B6H5 130 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 GGTLC1Q9BX51 225 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 GNB4Q9HAV0 340 aa12.03□□□□□ -0.48
SHMT2-202ENST00000414700 OR10J3Q5JRS4 329 aa12.02□□□□□ -0.49
SHMT2-202ENST00000414700 SMIM15Q7Z3B0 74 aa12.02□□□□□ -0.49
SHMT2-202ENST00000414700 CCDC140Q96MF4 163 aa12.02□□□□□ -0.49
SHMT2-202ENST00000414700 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.49
SHMT2-202ENST00000414700 C21orf62Q9NYP8 219 aa12.02□□□□□ -0.49
SHMT2-202ENST00000414700 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 SNURFLB1AK76 121 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 TSPOP30536 169 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 AMTP48728 403 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 H3BUA1 57 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 MT-ND6P03923 174 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 IGLC1P0CG04 106 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms