RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 Q9H3A6 140 aa9.88□□□□□ -0.83
HLA-DQB2-229ENST00000411527 A0A087X0K7 114 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 FABP12A6NFH5 140 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 H7BYZ3 331 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ZNF701M0R085 212 aaPredicted RBP9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 LINC00869P0C866 280 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 BTF3P20290 206 aaKnown RBP9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 M6PRP20645 277 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 FAUP35544 74 aaKnown RBP9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ESRGQ1W209 222 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 DYNC2LI1Q8TCX1 351 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 CCDC59Q9P031 241 aaKnown RBP9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 BOLA1Q9Y3E2 137 aa9.87□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ADAP1O75689 374 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 SFT2D2O95562 160 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ANXA7P20073 488 aaKnown RBP9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 HOXA5P20719 270 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 TNFSF8P32971 234 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 PLP1P60201 277 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 KIR3DS1Q14943 382 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 CCDC28AQ8IWP9 274 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 SOSTQ9BQB4 213 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 UPK3BQ9BT76 320 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ZNF586Q9NXT0 402 aa9.86□□□□□ -0.83
HLA-DQB2-229ENST00000411527 A0A1W2PPQ1 181 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 GAGE12BA1L429 117 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 PMS2P5A8MQ11 134 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 GAGE7O76087 117 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 GAGE12FP0CL80 117 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 GAGE12GP0CL81 117 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 GAGE12IP0CL82 117 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 SELENOTP62341 195 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 PPP1R1AQ13522 171 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 PATE2Q6UY27 113 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 S100A7AQ86SG5 101 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 C20orf144Q9BQM9 153 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 PARD6GQ9BYG4 376 aaPredicted RBP9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 MRPS26Q9BYN8 205 aaKnown RBP9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ARL6Q9H0F7 186 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 PSENENQ9NZ42 101 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 NDUFA13Q9P0J0 144 aa9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 MRPS16Q9Y3D3 137 aaKnown RBP9.85□□□□□ -0.83
HLA-DQB2-229ENST00000411527 SNURFLB1AK76 121 aa9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 MRPS12O15235 138 aaKnown RBP9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 RLN2P04090 185 aa9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 SNRPCP09234 159 aaKnown RBP9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 RRAS2P62070 204 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 POLR2GP62487 172 aaKnown RBP eCLIP9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ID3Q02535 119 aa9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 TOMM5Q8N4H5 51 aa9.84□□□□□ -0.83
HLA-DQB2-229ENST00000411527 EPM2AB3EWF7 344 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 H3BNG1 76 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 CCNKO75909 580 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 AP3S2P59780 193 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 LCN15Q6UWW0 184 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 CCDC190Q86UF4 302 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 MCFD2Q8NI22 146 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 RAB2BQ8WUD1 216 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 SLC25A21Q9BQT8 299 aaPredicted RBP9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 ARV1Q9H2C2 271 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 NPVFQ9HCQ7 196 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 ZNF331Q9NQX6 463 aaPredicted RBP9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 RNF24Q9Y225 148 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 HERC1Q15751 4861 aa9.83□□□□□ -0.84
HLA-DQB2-229ENST00000411527 PRAC2D3DTV9 90 aa9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 J3KRW8 73 aa9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 CXCL2P19875 107 aa9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 PYDC2Q56P42 97 aa9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 GFI1BQ5VTD9 330 aa9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 TRIM63Q969Q1 353 aa9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 SLC50A1Q9BRV3 221 aa9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 SLIRPQ9GZT3 109 aaKnown RBP9.82□□□□□ -0.84
HLA-DQB2-229ENST00000411527 H3BTX0 84 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 SSSCA1O60232 199 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 TMBIM6P55061 237 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 LINC00315P59091 139 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 SLC38A11Q08AI6 406 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 TEPPQ6URK8 271 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 LINC00305Q7Z4B0 112 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 SMIM8Q96KF7 97 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
HLA-DQB2-229ENST00000411527 TRAV12-3A0A0B4J271 114 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 K7EPK0 472 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 GOSR2O14653 212 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 METTL15P1P0C7V9 234 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 PXDC1Q5TGL8 231 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 Q6ZTI0 123 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 BPIFA4PQ86YQ2 179 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 BCL7BQ9BQE9 202 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 MGAT4CQ9UBM8 478 aa9.8□□□□□ -0.84
HLA-DQB2-229ENST00000411527 A0A096LPF7 62 aa9.79□□□□□ -0.84
HLA-DQB2-229ENST00000411527 FNDC10F2Z333 226 aa9.79□□□□□ -0.84
HLA-DQB2-229ENST00000411527 SLC17A3O00476 420 aa9.79□□□□□ -0.84
HLA-DQB2-229ENST00000411527 INAFM2P0DMQ5 153 aa9.79□□□□□ -0.84
HLA-DQB2-229ENST00000411527 FUSP35637 526 aaKnown RBP eCLIP9.79□□□□□ -0.84
HLA-DQB2-229ENST00000411527 TMEM14EPQ6UXP3 125 aa9.79□□□□□ -0.84
HLA-DQB2-229ENST00000411527 OR10P1Q8NGE3 313 aa9.79□□□□□ -0.84
HLA-DQB2-229ENST00000411527 VSIG2Q96IQ7 327 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms