RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 ZNF502Q8TBZ5 544 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 EEF1AKMT3Q96AZ1 226 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 ZNF414Q96IQ9 312 aa10.62□□□□□ -0.71
LIMS1-205ENST00000410093 RPP21Q9H633 154 aaKnown RBP10.62□□□□□ -0.71
LIMS1-205ENST00000410093 WNK2Q9Y3S1 2297 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 PRRC2AP48634 2157 aaKnown RBP10.61□□□□□ -0.71
LIMS1-205ENST00000410093 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 IGHV4-61A0A0C4DH41 118 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 PCP4L1A6NKN8 68 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 B4DSR2 109 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 H3BUA1 57 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 P01737 135 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 MSMBP08118 114 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 CBLN1P23435 193 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 FBLN7Q53RD9 439 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 Q86TA4 180 aa10.61□□□□□ -0.71
LIMS1-205ENST00000410093 NPIPB6E9PJ23 425 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 ATP6V0E1O15342 81 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
LIMS1-205ENST00000410093 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 C1orf194Q5T5A4 169 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 TMEM136Q6ZRR5 245 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 HSPB9Q9BQS6 159 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 GSN-AS1Q9NRJ2 163 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 CELSR1Q9NYQ6 3014 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 MED13LQ71F56 2210 aa10.6□□□□□ -0.71
LIMS1-205ENST00000410093 RIPPLY3P57055 190 aa10.59□□□□□ -0.71
LIMS1-205ENST00000410093 RHOGP84095 191 aa10.59□□□□□ -0.71
LIMS1-205ENST00000410093 PDZD11Q5EBL8 140 aa10.59□□□□□ -0.71
LIMS1-205ENST00000410093 LRRC75A-AS1Q8N1F1 130 aa10.59□□□□□ -0.71
LIMS1-205ENST00000410093 CLEC5AQ9NY25 188 aa10.59□□□□□ -0.71
LIMS1-205ENST00000410093 A0A087X0K7 114 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 OR2T8A6NH00 312 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 DIRC3C9JPN6 131 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 J3QLI3 93 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 IGF1P05019 195 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 TPPP2P59282 170 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 PSG3Q16557 428 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 ECSCRQ19T08 205 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 SAPCD1Q5SSQ6 148 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 FAM162BQ5T6X4 162 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 Q6AWC8 147 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 CYB5R2Q6BCY4 276 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 COX8CQ7Z4L0 72 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 NHLRC2Q8NBF2 726 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 NUP35Q8NFH5 326 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 ZNF580Q9UK33 172 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 A0A1B0GW15 77 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 APCSP02743 223 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 FOSL1P15407 271 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 FOXA3P55318 350 aaPredicted RBP10.58□□□□□ -0.72
LIMS1-205ENST00000410093 C19orf54Q5BKX5 351 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 FAM209BQ5JX69 171 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 Q5PR19 223 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 DMRTA1Q5VZB9 504 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 PRR27Q6MZM9 219 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 EXOC3-AS1Q8N2X6 119 aa10.58□□□□□ -0.72
LIMS1-205ENST00000410093 TEP1Q99973 2627 aaKnown RBP10.57□□□□□ -0.72
LIMS1-205ENST00000410093 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 TRAV40A0A0B4J280 105 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 HIGD1CA8MV81 97 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 ATP5G2Q06055 141 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 IQCJQ1A5X6 159 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 C16orf54Q6UWD8 224 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 RBPMS2Q6ZRY4 209 aaKnown RBP10.57□□□□□ -0.72
LIMS1-205ENST00000410093 BAGE3Q86Y29 109 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 WFDC11Q8NEX6 87 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 USMG5Q96IX5 58 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 NEU1Q99519 415 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 PSG8Q9UQ74 426 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 HIVEP1P15822 2718 aa10.57□□□□□ -0.72
LIMS1-205ENST00000410093 IGHV4-30-2A0A087WSY4 118 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 CT45A10P0DMU9 189 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 TCL1AP56279 114 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 RAB4BP61018 213 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 PRSS57Q6UWY2 283 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 CIARTQ8N365 385 aaPredicted RBP10.56□□□□□ -0.72
LIMS1-205ENST00000410093 PIFOQ8TCI5 191 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 SLC50A1Q9BRV3 221 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 ITPR3Q14573 2671 aa10.56□□□□□ -0.72
LIMS1-205ENST00000410093 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
LIMS1-205ENST00000410093 CLEC3BP05452 202 aa10.55□□□□□ -0.72
LIMS1-205ENST00000410093 GPR183P32249 361 aa10.55□□□□□ -0.72
LIMS1-205ENST00000410093 HBBP68871 147 aa10.55□□□□□ -0.72
LIMS1-205ENST00000410093 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
LIMS1-205ENST00000410093 TOMM20LQ6UXN7 152 aa10.55□□□□□ -0.72
LIMS1-205ENST00000410093 MRPL53Q96EL3 112 aaKnown RBP10.55□□□□□ -0.72
LIMS1-205ENST00000410093 ZFAND3Q9H8U3 227 aa10.55□□□□□ -0.72
LIMS1-205ENST00000410093 ABCA1O95477 2261 aa10.55□□□□□ -0.72
LIMS1-205ENST00000410093 RBAKDNA6NC62 111 aa10.54□□□□□ -0.72
LIMS1-205ENST00000410093 A6NDX4 124 aa10.54□□□□□ -0.72
LIMS1-205ENST00000410093 IGHG2P01859 326 aa10.54□□□□□ -0.72
LIMS1-205ENST00000410093 LINC01356Q8N9X3 169 aa10.54□□□□□ -0.72
LIMS1-205ENST00000410093 Q96MF0 132 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms