RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 C9orf170A2RU37 121 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 C5orf67F2Z3F1 127 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 CST8O60676 142 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 SPINT3P49223 89 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 INSL3P51460 131 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 TAF1AQ15573 450 aaPredicted RBP-0.08□□□□□ -2.42
PMS1-203ENST00000409593 SPATA45Q537H7 98 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 EIF5AL1Q6IS14 154 aaKnown RBP-0.08□□□□□ -2.42
PMS1-203ENST00000409593 OR10X1Q8NGY0 326 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 PPP1R14BQ96C90 147 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 ENY2Q9NPA8 101 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 PIEZO1Q92508 2521 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 DOCK4Q8N1I0 1966 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 ZGRF1Q86YA3 2104 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 TRBV30A0A0K0K1B3 111 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 C17orf112F2Z3M2 114 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 GGCTO75223 188 aaKnown RBP-0.08□□□□□ -2.42
PMS1-203ENST00000409593 CXCL1P09341 107 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 RAB5CP51148 216 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 FXYD4P59646 89 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 HSPE1P61604 102 aaKnown RBP-0.08□□□□□ -2.42
PMS1-203ENST00000409593 AKIRIN2Q53H80 203 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 ARPINQ7Z6K5 226 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 OR5D16Q8NGK9 328 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 PLAC4Q8WY50 150 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 HYLS1Q96M11 299 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 LIMD2Q9BT23 127 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 NMNAT1Q9HAN9 279 aaPredicted RBP-0.08□□□□□ -2.42
PMS1-203ENST00000409593 MED29Q9NX70 200 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 FAM32AQ9Y421 112 aaKnown RBP-0.08□□□□□ -2.42
PMS1-203ENST00000409593 ARL5AQ9Y689 179 aa-0.08□□□□□ -2.42
PMS1-203ENST00000409593 NISCHQ9Y2I1 1504 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 CAMSAP1Q5T5Y3 1602 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 MYLKQ15746 1914 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 TRAV27A0A087WT01 109 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 K7ERJ3 54 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 IFNA7P01567 189 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 OR10J4P0C629 311 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 MYL5Q02045 173 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 EIF3IQ13347 325 aaKnown RBP-0.09□□□□□ -2.42
PMS1-203ENST00000409593 Q6ZS92 163 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 OR10AG1Q8NH19 301 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 CHCHD1Q96BP2 118 aaKnown RBP-0.09□□□□□ -2.42
PMS1-203ENST00000409593 DGCR14Q96DF8 476 aaKnown RBP-0.09□□□□□ -2.42
PMS1-203ENST00000409593 C9orf16Q9BUW7 83 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 OPTCQ9UBM4 332 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 OR52A1Q9UKL2 312 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 KNTC1P50748 2209 aa-0.09□□□□□ -2.42
PMS1-203ENST00000409593 ADGRL3Q9HAR2 1447 aa-0.1□□□□□ -2.42
PMS1-203ENST00000409593 ZNF727A8MUV8 499 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 CCL4P13236 92 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 NFYBP25208 207 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 ARPP19P56211 112 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 NCALDP61601 193 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 ASB16-AS1Q495Z4 193 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 OCIAD2Q56VL3 154 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 ZHX1-C8orf76Q96EF9 292 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 BTF3L4Q96K17 158 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 CCL19Q99731 98 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 POPDC3Q9HBV1 291 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 ZFYVE26Q68DK2 2539 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 NUP210LQ5VU65 1888 aa-0.1□□□□□ -2.43
PMS1-203ENST00000409593 hDV103S1A0JD37 113 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 ODAMA1E959 279 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 IDO1P14902 403 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 MIR22HGQ0VDD5 57 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 KLRD1Q13241 179 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 MSMO1Q15800 293 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 FOXI2Q6ZQN5 318 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 Q6ZQY7 126 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 ZCCHC23Q6ZST2 131 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 Q86TA4 180 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 OR4K15Q8NH41 348 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 ZNF431Q8TF32 576 aaPredicted RBP-0.11□□□□□ -2.43
PMS1-203ENST00000409593 GPX7Q96SL4 187 aaPredicted RBP-0.11□□□□□ -2.43
PMS1-203ENST00000409593 ARMC1Q9NVT9 282 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 JPT1Q9UK76 154 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 N4BP2Q86UW6 1770 aaPredicted RBP-0.11□□□□□ -2.43
PMS1-203ENST00000409593 COL6A3P12111 3177 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 TPRP12270 2363 aaKnown RBP-0.11□□□□□ -2.43
PMS1-203ENST00000409593 BANF1O75531 89 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 LY6G6CO95867 125 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 SERPINA1P01009 418 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 TRGC2P03986 189 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 IFNA6P05013 189 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 PDE6GP18545 87 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 TMBIM6P55061 237 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 UBR2Q8IWV8 1755 aa-0.11□□□□□ -2.43
PMS1-203ENST00000409593 CD109Q6YHK3 1445 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 RYR1P21817 5038 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 CTTNBP2Q8WZ74 1663 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 IGSF10Q6WRI0 2623 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 LOC285556D6RIA3 1793 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 DUXBA0A1W2PPF3 345 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 IGHV3-33P01772 117 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 CAPZBP47756 277 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 RPL37AP61513 92 aaKnown RBP-0.12□□□□□ -2.43
PMS1-203ENST00000409593 GNG5P63218 68 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 FADDQ13158 208 aa-0.12□□□□□ -2.43
PMS1-203ENST00000409593 PRR15Q8IV56 129 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms