RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 NCBP2LA6PVI3 153 aaKnown RBP10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 TSTD3H0UI37 97 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 GNG7O60262 68 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 IGLV2-8P01709 118 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 IGHV3-48P01763 117 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 AMBPP02760 352 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 GP9P14770 177 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 TPPP2P59282 170 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 Q0VG73 95 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 OR5I1Q13606 314 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 CT83Q5H943 113 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 FAM162BQ5T6X4 162 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 GFI1BQ5VTD9 330 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 MORN5Q5VZ52 161 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 OR8I2Q8N0Y5 310 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 GBGT1Q8N5D6 347 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 ARL6IP6Q8N6S5 226 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 SIGLECL1Q8N7X8 197 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 SLC25A39Q9BZJ4 359 aaPredicted RBP10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 ZNF492Q9P255 531 aa10.12□□□□□ -0.79
SMARCB1-203ENST00000407082 IGHV1-69DA0A0B4J2H0 117 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 SERTM2A0A1B0GWG4 89 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 FBLL1A6NHQ2 334 aaKnown RBP10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 A8MWL6 223 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 SNURFLB1AK76 121 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 K7EIM0 57 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 FSHBP01225 129 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 IGHV1-69P01742 117 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 ADMP35318 185 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 IER3P46695 156 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 IQCJQ1A5X6 159 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 Q8N6K4 173 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 WIPF2Q8TF74 440 aaPredicted RBP10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 SHANK2-AS3Q9BTD1 123 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 Q9H3A6 140 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 NAT8BQ9UHF3 227 aa10.11□□□□□ -0.79
SMARCB1-203ENST00000407082 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 H3BRN7 92 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 ESDP10768 282 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 FCGR2BP31994 310 aaPredicted RBP10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 RAB9AP51151 201 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 PKIAP61925 76 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 PDE6HQ13956 83 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 RUSC1-AS1Q66K80 236 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 ZNF600Q6ZNG1 722 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 LHFPL4Q7Z7J7 247 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 OR4B1Q8NGF8 309 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
SMARCB1-203ENST00000407082 IGLV11-55A0A075B6I3 123 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 NPFFO15130 113 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 HLA-DRB1P01911 266 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 TCRAP04437 139 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 APELAP0DMC3 54 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 NUDT10Q8NFP7 164 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 VN1R17PQ8TDU5 208 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 RNF125Q96EQ8 232 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 NUDT11Q96G61 164 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 C21orf62Q9NYP8 219 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 ZFP30Q9Y2G7 519 aa10.09□□□□□ -0.79
SMARCB1-203ENST00000407082 IGHV3-21A0A0B4J1V1 117 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 DNAJC9-AS1A6NH13 148 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 IGKV1-17P01599 117 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 CBLN1P23435 193 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 SAA4P35542 130 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 CSN1S1P47710 185 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 RAB4BP61018 213 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 PSG9Q00887 426 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 Q56UQ5 140 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 LDLRAD2Q5SZI1 272 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 BCL6BQ8N143 479 aaPredicted RBP10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 NOL4LQ96MY1 436 aaPredicted RBP10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 AAMDCQ9H7C9 122 aa10.08□□□□□ -0.8
SMARCB1-203ENST00000407082 LTAP01374 205 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 P01737 135 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 APCSP02743 223 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 IL4P05112 153 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 CTAG1AP78358 180 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 KLK9Q2XQG4 91 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 TMEM136Q6ZRR5 245 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 ZNF491Q8N8L2 437 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 TMEM75Q8N9X5 138 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 FAM110DQ8TAY7 271 aaPredicted RBP10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 RPP21Q9H633 154 aaKnown RBP10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 KLK9Q9UKQ9 250 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 WNK1Q9H4A3 2382 aa10.07□□□□□ -0.8
SMARCB1-203ENST00000407082 TRBV19A0A075B6N1 114 aa10.06□□□□□ -0.8
SMARCB1-203ENST00000407082 NDUFB8O95169 186 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms