RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 NDUFAF3Q9BU61 184 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 FBLN5Q9UBX5 448 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 C9orf139Q6ZV77 190 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 PLSCR4Q9NRQ2 329 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 A0A0A6YYD4 124 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 ZFP36L1Q07352 338 aaKnown RBP9.89□□□□□ -0.83
SMCR8-201ENST00000406438 SELENOKQ9Y6D0 94 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 SHISA3A0PJX4 238 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 LYPD1Q8N2G4 141 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 TRAV5A0A0B4J249 113 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 NCR2O95944 276 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 CGB3P0DN86 165 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 SNHG12Q9BXW3 62 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 IGKV1-9A0A0C4DH69 117 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 UBE2E2Q96LR5 201 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 TIMM21Q9BVV7 248 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 UBE2CO00762 179 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 SH2D1AO60880 128 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 NUP35Q8NFH5 326 aa9.88□□□□□ -0.83
SMCR8-201ENST00000406438 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 LYZL1Q6UWQ5 148 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 Q9UFV3 132 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 RPUSD1Q9UJJ7 312 aaKnown RBP9.87□□□□□ -0.83
SMCR8-201ENST00000406438 NKAPP1Q8N9T2 125 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 PTPN13Q12923 2485 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 SRSF8Q9BRL6 282 aaKnown RBP9.87□□□□□ -0.83
SMCR8-201ENST00000406438 TMEM126AQ9H061 195 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 H0YJW9 148 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 TCRAP04437 139 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 Q5PR19 223 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 MPZP25189 248 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 GGNQ86UU5 652 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
SMCR8-201ENST00000406438 OCIAD2Q56VL3 154 aa9.87□□□□□ -0.83
SMCR8-201ENST00000406438 BCL6BQ8N143 479 aaPredicted RBP9.87□□□□□ -0.83
SMCR8-201ENST00000406438 ESDP10768 282 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 ID3Q02535 119 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 PRIMA1Q86XR5 153 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 AGMATQ9BSE5 352 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 SRSF3P84103 164 aaKnown RBP9.86□□□□□ -0.83
SMCR8-201ENST00000406438 LAIR2Q6ISS4 152 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 DAZ1Q9NQZ3 744 aaKnown RBP9.86□□□□□ -0.83
SMCR8-201ENST00000406438 CGB7P0DN87 165 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 GUSBP1Q15486 140 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 BRD3OSQ6XYD6 125 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 HIST1H2BLQ99880 126 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 SSBP2P81877 361 aaPredicted RBP9.86□□□□□ -0.83
SMCR8-201ENST00000406438 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
SMCR8-201ENST00000406438 TNRC6BQ9UPQ9 1833 aaKnown RBP9.86□□□□□ -0.83
SMCR8-201ENST00000406438 C14orf178Q8N769 122 aaPredicted RBP9.86□□□□□ -0.83
SMCR8-201ENST00000406438 THAP8Q8NA92 274 aa9.86□□□□□ -0.83
SMCR8-201ENST00000406438 PINLYPA6NC86 204 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 GATA3P23771 443 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 J3QRE1 110 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 SIGLEC9Q9Y336 463 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 ATG2AQ2TAZ0 1938 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 CSPG4Q6UVK1 2322 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 PRB4P10163 310 aaPredicted RBP9.85□□□□□ -0.83
SMCR8-201ENST00000406438 KLF17Q5JT82 389 aaPredicted RBP9.85□□□□□ -0.83
SMCR8-201ENST00000406438 PRTN3P24158 256 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 ZNF114Q8NC26 417 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 SPXQ9BT56 116 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 F5H768 121 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 H3BMM0 161 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 LHBP01229 141 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 GNLYP22749 145 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 CSRP3P50461 194 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 WDR83OSQ9Y284 106 aa9.85□□□□□ -0.83
SMCR8-201ENST00000406438 SAA4P35542 130 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 APOC4P55056 127 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 LIME1Q9H400 295 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 TRAV8-3A0A0A6YYJ7 113 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 TRAV1-1A0A0B4J248 108 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 DAD1P61803 113 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 PDE6HQ13956 83 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 E9PQ18 207 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 ATRAIDQ6UW56 229 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 DMRTC2Q8IXT2 367 aaPredicted RBP9.84□□□□□ -0.83
SMCR8-201ENST00000406438 RFNGQ9Y644 331 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 BTCP35070 178 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 TRPT1Q86TN4 253 aaKnown RBP9.84□□□□□ -0.83
SMCR8-201ENST00000406438 FGFBP3Q8TAT2 258 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 TMEM158Q8WZ71 300 aa9.84□□□□□ -0.83
SMCR8-201ENST00000406438 LTBP1Q14766 1721 aa9.84□□□□□ -0.84
SMCR8-201ENST00000406438 NTN3O00634 580 aaPredicted RBP9.83□□□□□ -0.84
SMCR8-201ENST00000406438 WFDC1Q9HC57 220 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 Q8TAT8 98 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 A0A087WWL8 130 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 LY6G6FQ5SQ64 297 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 CD5LO43866 347 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 SLC25A16P16260 332 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 LY6G5BQ8NDX9 201 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms