RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 UBE2V1Q13404 147 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 EXOC3-AS1Q8N2X6 119 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 CHCHD1Q96BP2 118 aaKnown RBP9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 C20orf144Q9BQM9 153 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 PRADC1Q9BSG0 188 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 PMS2P5A8MQ11 134 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 SEC11AP67812 179 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 ORAOV1Q8WV07 137 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 SLC25A39Q9BZJ4 359 aaPredicted RBP9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 MEGF9Q9H1U4 602 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 PTPRQQ9UMZ3 2332 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 COL4A4P53420 1690 aaPredicted RBP9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 ROS1P08922 2347 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 H3BRM9 83 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 TSKUQ8WUA8 353 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 SEPSECSQ9HD40 501 aaKnown RBP9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 POLR3KQ9Y2Y1 108 aaPredicted RBP9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 INSP01308 110 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 PRR31Q5SQ13 230 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 CACNG7P62955 275 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 ATP5L2Q7Z4Y8 100 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 OR5A1Q8NGJ0 315 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 OR2K2Q8NGT1 345 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 LY96Q9Y6Y9 160 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 CRPP02741 224 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 SCGB1A1P11684 91 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 KLF17Q5JT82 389 aaPredicted RBP9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 NUDT11Q96G61 164 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 IGHV4-30-2A0A087WSY4 118 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 IGHV4-61A0A0C4DH41 118 aa9.48□□□□□ -0.89
RAPGEF3-204ENST00000405493 NPIPB5A8MRT5 1133 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 SYNJ2BPP57105 145 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 PRSS57Q6UWY2 283 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 POLEQ07864 2286 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 CREBBPQ92793 2442 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 MED12Q93074 2177 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 A0A0G2JRQ6 117 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 RIPPLY3P57055 190 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 C2orf16Q68DN1 1984 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 NOTCH2Q04721 2471 aa9.47□□□□□ -0.89
RAPGEF3-204ENST00000405493 NDPQ00604 133 aa9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 DEFB112Q30KQ8 113 aa9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 RASL11AQ6T310 242 aa9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 IL17RELQ6ZVW7 336 aa9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 C1orf147Q96MC9 270 aaPredicted RBP9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 ATP6V0E1O15342 81 aa9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 NTF4P34130 210 aa9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 SRSF1Q07955 248 aaKnown RBP eCLIP9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 FAM120AOSQ5T036 256 aa9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 RPL35AP18077 110 aaKnown RBP9.46□□□□□ -0.89
RAPGEF3-204ENST00000405493 ZNF407Q9C0G0 2248 aa9.46□□□□□ -0.9
RAPGEF3-204ENST00000405493 Q6ZRM9 215 aa9.46□□□□□ -0.9
RAPGEF3-204ENST00000405493 C8orf31Q8N9H6 132 aa9.46□□□□□ -0.9
RAPGEF3-204ENST00000405493 LINC00477Q96M19 166 aa9.46□□□□□ -0.9
RAPGEF3-204ENST00000405493 LOXL1Q08397 574 aaPredicted RBP9.46□□□□□ -0.9
RAPGEF3-204ENST00000405493 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
RAPGEF3-204ENST00000405493 DNAL4O96015 105 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 CUL9Q8IWT3 2517 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 OVOL3O00110 214 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 HBDP02042 147 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 MRPL27Q9P0M9 148 aaKnown RBP9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 ZNRD1Q9P1U0 126 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 ACACBO00763 2458 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 OR9G4Q8NGQ1 327 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 ZNF688P0C7X2 276 aa9.45□□□□□ -0.9
RAPGEF3-204ENST00000405493 NDUFS7O75251 213 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 TOMM40O96008 361 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 HSD52Q0P140 79 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 VCX2Q9H322 139 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 PKDREJQ9NTG1 2253 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 NDUFB8O95169 186 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 Q0VG73 95 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 ZNF833PQ6ZTB9 187 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 TMEM86BQ8N661 226 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 NHP2Q9NX24 153 aaKnown RBP9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 APOMO95445 188 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 TYMSP04818 313 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 IL15RAQ13261 267 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 IGFL4Q6B9Z1 124 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 C15orf62A8K5M9 175 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 F2Z2F3 143 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 CFAP161Q6P656 301 aa9.44□□□□□ -0.9
RAPGEF3-204ENST00000405493 IGKV1-16P04430 117 aa9.43□□□□□ -0.9
RAPGEF3-204ENST00000405493 CNTFRP26992 372 aa9.43□□□□□ -0.9
RAPGEF3-204ENST00000405493 LYPD6BQ8NI32 183 aa9.43□□□□□ -0.9
RAPGEF3-204ENST00000405493 CADP27708 2225 aa9.43□□□□□ -0.9
RAPGEF3-204ENST00000405493 ZNF524Q96C55 264 aa9.43□□□□□ -0.9
RAPGEF3-204ENST00000405493 CHTOPQ9Y3Y2 248 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms