RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 EIF3GO75821 320 aaKnown RBP eCLIP21.78■■□□□ 1.08
USP42-202ENST00000404008 CDC34P49427 236 aaPredicted RBP21.78■■□□□ 1.08
USP42-202ENST00000404008 DEFB121Q5J5C9 76 aa21.78■■□□□ 1.08
USP42-202ENST00000404008 PSMG4Q5JS54 123 aa21.78■■□□□ 1.08
USP42-202ENST00000404008 AKR1C8PQ5T2L2 129 aa21.78■■□□□ 1.08
USP42-202ENST00000404008 LCN15Q6UWW0 184 aa21.78■■□□□ 1.08
USP42-202ENST00000404008 SLC51BQ86UW2 128 aa21.78■■□□□ 1.08
USP42-202ENST00000404008 OR51M1Q9H341 326 aa21.78■■□□□ 1.08
USP42-202ENST00000404008 PRKDCP78527 4128 aaKnown RBP21.77■■□□□ 1.08
USP42-202ENST00000404008 A8MZ25 164 aa21.77■■□□□ 1.08
USP42-202ENST00000404008 ZNF124Q15973 351 aa21.77■■□□□ 1.08
USP42-202ENST00000404008 GUK1Q16774 197 aa21.77■■□□□ 1.08
USP42-202ENST00000404008 ZNF503Q96F45 646 aa21.77■■□□□ 1.08
USP42-202ENST00000404008 CITED4Q96RK1 184 aa21.77■■□□□ 1.08
USP42-202ENST00000404008 PAXXQ9BUH6 204 aa21.77■■□□□ 1.08
USP42-202ENST00000404008 ZNF586Q9NXT0 402 aa21.77■■□□□ 1.08
USP42-202ENST00000404008 TRAV8-2A0A0B4J237 113 aa21.76■■□□□ 1.07
USP42-202ENST00000404008 H3BTX0 84 aa21.76■■□□□ 1.07
USP42-202ENST00000404008 OR7C2O60412 319 aa21.76■■□□□ 1.07
USP42-202ENST00000404008 HIST1H1EP10412 219 aaKnown RBP21.76■■□□□ 1.07
USP42-202ENST00000404008 SRD5A3Q9H8P0 318 aa21.76■■□□□ 1.07
USP42-202ENST00000404008 RAB24Q969Q5 203 aa21.75■■□□□ 1.07
USP42-202ENST00000404008 FXYD5Q96DB9 178 aa21.75■■□□□ 1.07
USP42-202ENST00000404008 SAT2Q96F10 170 aaPredicted RBP21.75■■□□□ 1.07
USP42-202ENST00000404008 ACTR3CQ9C0K3 210 aaPredicted RBP21.75■■□□□ 1.07
USP42-202ENST00000404008 TUBA4BQ9H853 241 aa21.75■■□□□ 1.07
USP42-202ENST00000404008 SLC17A3O00476 420 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 LRRC20Q8TCA0 184 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 RNF141Q8WVD5 230 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 TMED6Q8WW62 240 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 C20orf173Q96LM9 149 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 LINC00052Q96N35 136 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 PLA2G2EQ9NZK7 142 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 TRBV19A0A075B6N1 114 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 HMGB3O15347 200 aaKnown RBP21.74■■□□□ 1.07
USP42-202ENST00000404008 OR10J4P0C629 311 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 IGFL4Q6B9Z1 124 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 SLC50A1Q9BRV3 221 aa21.74■■□□□ 1.07
USP42-202ENST00000404008 ZNF331Q9NQX6 463 aaPredicted RBP21.74■■□□□ 1.07
USP42-202ENST00000404008 STAG3L2P0CL84 134 aa21.73■■□□□ 1.07
USP42-202ENST00000404008 STAG3L3P0CL85 134 aa21.73■■□□□ 1.07
USP42-202ENST00000404008 ZNF726P1Q15940 193 aa21.73■■□□□ 1.07
USP42-202ENST00000404008 PQLC2Q6ZP29 291 aa21.73■■□□□ 1.07
USP42-202ENST00000404008 SSX7Q7RTT5 188 aa21.73■■□□□ 1.07
USP42-202ENST00000404008 RNF182Q8N6D2 247 aa21.73■■□□□ 1.07
USP42-202ENST00000404008 UMAD1C9J7I0 102 aa21.72■■□□□ 1.07
USP42-202ENST00000404008 ZNF253O75346 499 aa21.72■■□□□ 1.07
USP42-202ENST00000404008 FRMD6-AS1P0C7T7 363 aa21.72■■□□□ 1.07
USP42-202ENST00000404008 UBE2L3P68036 154 aaKnown RBP21.72■■□□□ 1.07
USP42-202ENST00000404008 PDE6HQ13956 83 aa21.72■■□□□ 1.07
USP42-202ENST00000404008 BLNKQ8WV28 456 aa21.72■■□□□ 1.07
USP42-202ENST00000404008 NBEAP1P0C6P0 100 aa21.71■■□□□ 1.07
USP42-202ENST00000404008 EIF5AL1Q6IS14 154 aaKnown RBP21.71■■□□□ 1.07
USP42-202ENST00000404008 BOLA1Q9Y3E2 137 aa21.71■■□□□ 1.07
USP42-202ENST00000404008 CTXND1A0A1B0GTU2 59 aa21.7■■□□□ 1.06
USP42-202ENST00000404008 RBMY1BA6NDE4 496 aaKnown RBP21.7■■□□□ 1.06
USP42-202ENST00000404008 RBMY1EA6NEQ0 496 aaKnown RBP21.7■■□□□ 1.06
USP42-202ENST00000404008 NDUFB4O95168 129 aa21.7■■□□□ 1.06
USP42-202ENST00000404008 RBMY1DP0C7P1 496 aaKnown RBP21.7■■□□□ 1.06
USP42-202ENST00000404008 ARL14EPLP0DKL9 152 aa21.7■■□□□ 1.06
USP42-202ENST00000404008 HLA-DMBP28068 263 aa21.7■■□□□ 1.06
USP42-202ENST00000404008 BOLA2-SMG1P6H3BVE0 249 aa21.69■■□□□ 1.06
USP42-202ENST00000404008 LINC00322Q6ZN03 302 aaPredicted RBP21.69■■□□□ 1.06
USP42-202ENST00000404008 FHITP49789 147 aa21.68■■□□□ 1.06
USP42-202ENST00000404008 KNCNA6PVL3 124 aa21.67■■□□□ 1.06
USP42-202ENST00000404008 DEFB1P60022 68 aa21.67■■□□□ 1.06
USP42-202ENST00000404008 PSG9Q00887 426 aa21.67■■□□□ 1.06
USP42-202ENST00000404008 PSG3Q16557 428 aa21.67■■□□□ 1.06
USP42-202ENST00000404008 CLEC5AQ9NY25 188 aa21.67■■□□□ 1.06
USP42-202ENST00000404008 CXorf1O96002 111 aa21.66■■□□□ 1.06
USP42-202ENST00000404008 ACTL10Q5JWF8 245 aa21.66■■□□□ 1.06
USP42-202ENST00000404008 DPPA3Q6W0C5 159 aa21.66■■□□□ 1.06
USP42-202ENST00000404008 PHYHIPLQ96FC7 376 aa21.66■■□□□ 1.06
USP42-202ENST00000404008 SAV1Q9H4B6 383 aaPredicted RBP21.66■■□□□ 1.06
USP42-202ENST00000404008 AGRNO00468 2067 aa21.66■■□□□ 1.06
USP42-202ENST00000404008 GDF5OSQ5U4N7 250 aa21.65■■□□□ 1.06
USP42-202ENST00000404008 FOXI2Q6ZQN5 318 aa21.65■■□□□ 1.06
USP42-202ENST00000404008 STHQ8IWL8 128 aa21.65■■□□□ 1.06
USP42-202ENST00000404008 ZNF738Q8NE65 137 aa21.65■■□□□ 1.06
USP42-202ENST00000404008 FAM213BQ8TBF2 198 aa21.65■■□□□ 1.06
USP42-202ENST00000404008 LOC102724200A0A096LPH7 203 aaPredicted RBP21.64■■□□□ 1.06
USP42-202ENST00000404008 GCHFRP30047 84 aa21.64■■□□□ 1.06
USP42-202ENST00000404008 SUN5Q8TC36 379 aa21.64■■□□□ 1.06
USP42-202ENST00000404008 HLA-DRB4P13762 266 aa21.63■■□□□ 1.05
USP42-202ENST00000404008 EXOC3-AS1Q8N2X6 119 aa21.63■■□□□ 1.05
USP42-202ENST00000404008 B9D2Q9BPU9 175 aa21.63■■□□□ 1.05
USP42-202ENST00000404008 HLA-DRB4X5D2U9 266 aa21.63■■□□□ 1.05
USP42-202ENST00000404008 MAP1LC3B2A6NCE7 125 aa21.62■■□□□ 1.05
USP42-202ENST00000404008 F6UB75 175 aa21.62■■□□□ 1.05
USP42-202ENST00000404008 RPL35AP18077 110 aaKnown RBP21.62■■□□□ 1.05
USP42-202ENST00000404008 RAB5CP51148 216 aa21.62■■□□□ 1.05
USP42-202ENST00000404008 TRPT1Q86TN4 253 aaKnown RBP21.62■■□□□ 1.05
USP42-202ENST00000404008 MAP1LC3BQ9GZQ8 125 aa21.62■■□□□ 1.05
USP42-202ENST00000404008 AAMDCQ9H7C9 122 aa21.62■■□□□ 1.05
USP42-202ENST00000404008 COL7A1Q02388 2944 aa21.62■■□□□ 1.05
USP42-202ENST00000404008 A0A0J9YX75 114 aa21.61■■□□□ 1.05
USP42-202ENST00000404008 H3BMM0 161 aa21.61■■□□□ 1.05
USP42-202ENST00000404008 SULT1A2P50226 295 aa21.61■■□□□ 1.05
USP42-202ENST00000404008 LYPD1Q8N2G4 141 aa21.61■■□□□ 1.05
USP42-202ENST00000404008 RPUSD4Q96CM3 377 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms