RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TAF9BQ9HBM6 251 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 PIK3C2AO00443 1686 aa1.38□□□□□ -2.19
HMGB1P17-201ENST00000403495 STRCQ7RTU9 1775 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 NISCHQ9Y2I1 1504 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 IGKV2D-26A0A0A0MRZ7 120 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRBV6-5A0A0K0K1A5 114 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 TCRBV4S1A1TA0A5B7 111 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 TMEM189A5PLL7 270 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 B4DSR2 109 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 H3BMG7 143 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 M0QZK8 103 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 LYRM1O43325 122 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 DPM2O94777 84 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 IGLV1-51P01701 117 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 SDC4P31431 198 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 CDK6Q00534 326 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 CDK5R1Q15078 307 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 C10orf55Q5SWW7 151 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 CLECL1Q8IZS7 167 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 Q8N814 137 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR4B1Q8NGF8 309 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 MUCL1Q96DR8 90 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 HYLS1Q96M11 299 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 PRELID3AQ96N28 172 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 CBLN4Q9NTU7 201 aa1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 TCOF1Q13428 1488 aaKnown RBP1.37□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRBV27A0A0K0K1C4 114 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 C5orf58C9J3I9 102 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 TNFSF15O95150 251 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 HMGN1P05114 100 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 SRP9P49458 86 aaKnown RBP1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 DSCR4P56555 118 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 CKS1BP61024 79 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 MRPS36P82909 103 aaKnown RBP1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 CCDC88AQ3V6T2 1871 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 FRMPD1Q5SYB0 1578 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 C1orf134Q5TEV5 83 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 HEATR5AQ86XA9 2040 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 TCTE3Q8IZS6 198 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 LRRC18Q8N456 261 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 C15orf53Q8NAA6 179 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR51A4Q8NGJ6 313 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 DIRC1Q969H9 104 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 RAB37Q96AX2 223 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 FAM107BQ9H098 131 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 NIT2Q9NQR4 276 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 TPRKBQ9Y3C4 175 aa1.36□□□□□ -2.19
HMGB1P17-201ENST00000403495 CCDC88CQ9P219 2028 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 SDK1Q7Z5N4 2213 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 KIAA1107Q9UPP5 1409 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 hDV103S1A0JD37 113 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 C9JAW5 83 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 E7EUB6 86 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR2H2O95918 312 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 SCTP09683 121 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 FABP4P15090 132 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 CRYGSP22914 178 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 MAXP61244 160 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 C1orf137Q5JT78 98 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 MORN4Q8NDC4 146 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 AP1S3Q96PC3 154 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 TP53RKQ96S44 253 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 GGACTQ9BVM4 153 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 HSPB8Q9UJY1 196 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 HIGD1AQ9Y241 93 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 DLC1Q96QB1 1528 aa1.35□□□□□ -2.19
HMGB1P17-201ENST00000403495 DENND4CQ5VZ89 1909 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 TNS3Q68CZ2 1445 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 DOCK3Q8IZD9 2030 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRAV27A0A087WT01 109 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 TRAV10A0A0B4J240 114 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 A0A1B0GW64 132 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 CCDC160A6NGH7 325 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 HYPMO75409 117 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 ERC2-IT1O76042 136 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 CD2P06729 351 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 PAEPP09466 180 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 RNASE3P12724 160 aaKnown RBP1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 TPT1P13693 172 aaKnown RBP1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 RPL22P35268 128 aaKnown RBP1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 SMIM21Q3B7S5 101 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 MORN2Q502X0 79 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 Q5XG85 94 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 TMEM14EPQ6UXP3 125 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR5A2Q8NGI9 324 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR4C6Q8NH72 309 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 NAT14Q8WUY8 206 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 OR4C12Q96R67 309 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 REG4Q9BYZ8 158 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 CALML5Q9NZT1 146 aa1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 SOX21Q9Y651 276 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P17-201ENST00000403495 CEP152O94986 1710 aa1.34□□□□□ -2.2
HMGB1P17-201ENST00000403495 DSPPQ9NZW4 1301 aa1.34□□□□□ -2.2
HMGB1P17-201ENST00000403495 UBR2Q8IWV8 1755 aa1.34□□□□□ -2.2
HMGB1P17-201ENST00000403495 MED23Q9ULK4 1368 aa1.34□□□□□ -2.2
HMGB1P17-201ENST00000403495 KDM6AO15550 1401 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 FAM135BQ49AJ0 1406 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 PLXND1Q9Y4D7 1925 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 BAZ2BQ9UIF8 2168 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms