RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 EYSQ5T1H1 3165 aa11.19□□□□□ -0.62
RUNX3-203ENST00000399916 TRANK1O15050 2925 aa11.19□□□□□ -0.62
RUNX3-203ENST00000399916 LGALS3P17931 250 aaKnown RBP11.19□□□□□ -0.62
RUNX3-203ENST00000399916 PMS2CLQ68D20 193 aa11.19□□□□□ -0.62
RUNX3-203ENST00000399916 ZFHX2Q9C0A1 2572 aaPredicted RBP11.19□□□□□ -0.62
RUNX3-203ENST00000399916 ATP5J2P56134 94 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 MDP1Q86V88 176 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
RUNX3-203ENST00000399916 ATP5LO75964 103 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 TCRAP04437 139 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 MPV17P39210 176 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 LYZL1Q6UWQ5 148 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 ZNF714Q96N38 554 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 C17orf82Q86X59 251 aaPredicted RBP11.18□□□□□ -0.62
RUNX3-203ENST00000399916 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 SIGLEC8Q9NYZ4 499 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 SPINK14Q6IE38 97 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 LOXL2Q9Y4K0 774 aa11.18□□□□□ -0.62
RUNX3-203ENST00000399916 FNDC10F2Z333 226 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 HLA-DRB4P13762 266 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 NTN5Q8WTR8 489 aaPredicted RBP11.17□□□□□ -0.62
RUNX3-203ENST00000399916 HLA-DRB4X5D2U9 266 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 MUC6Q6W4X9 2439 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 IGHV3OR16-13A0A075B7E8 117 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 IGHV3-74A0A0B4J1X5 117 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 FOXG1P55316 489 aaPredicted RBP11.17□□□□□ -0.62
RUNX3-203ENST00000399916 PCOLCEQ15113 449 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 MOGAT3Q86VF5 341 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 REPIN1Q9BWE0 567 aaKnown RBP11.17□□□□□ -0.62
RUNX3-203ENST00000399916 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 IGLV3-12A0A075B6K2 115 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 IGLV3-32A0A0A0MS00 114 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 M0QXV9 152 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 PSPNO60542 156 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 NPC2P61916 151 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 C10orf55Q5SWW7 151 aa11.17□□□□□ -0.62
RUNX3-203ENST00000399916 CFAP54Q96N23 3096 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 TECTAO75443 2155 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 FCN3O75636 299 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 IGLV3-19P01714 112 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 ZNF146Q15072 292 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 FMC1Q96HJ9 113 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 NGBQ9NPG2 151 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 ADIPOQQ15848 244 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 TMEM42Q69YG0 159 aa11.16□□□□□ -0.62
RUNX3-203ENST00000399916 WNK1Q9H4A3 2382 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 DUTP33316 252 aaKnown RBP11.15□□□□□ -0.62
RUNX3-203ENST00000399916 PMVKQ15126 192 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 RRN3P1Q2M238 152 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 FAM201AQ5SY85 155 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 C2orf82Q6UX34 121 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 MALRD1Q5VYJ5 2156 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 CCDC179H3BU77 68 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 LINC01545Q5VT33 79 aa11.15□□□□□ -0.62
RUNX3-203ENST00000399916 SLC25A48Q6ZT89 311 aaKnown RBP11.15□□□□□ -0.62
RUNX3-203ENST00000399916 MEOX1P50221 254 aa11.15□□□□□ -0.63
RUNX3-203ENST00000399916 MFAP4P55083 255 aa11.15□□□□□ -0.63
RUNX3-203ENST00000399916 KLRD1Q13241 179 aa11.15□□□□□ -0.63
RUNX3-203ENST00000399916 ZNF497Q6ZNH5 498 aa11.15□□□□□ -0.63
RUNX3-203ENST00000399916 SCNM1Q9BWG6 230 aa11.15□□□□□ -0.63
RUNX3-203ENST00000399916 PRDM14Q9GZV8 571 aa11.15□□□□□ -0.63
RUNX3-203ENST00000399916 REV3LO60673 3130 aa11.14□□□□□ -0.63
RUNX3-203ENST00000399916 GDF5OSQ5U4N7 250 aa11.14□□□□□ -0.63
RUNX3-203ENST00000399916 IGHV1-45A0A0A0MS14 117 aa11.14□□□□□ -0.63
RUNX3-203ENST00000399916 CELSR3Q9NYQ7 3312 aa11.14□□□□□ -0.63
RUNX3-203ENST00000399916 BDP1A6H8Y1 2624 aa11.14□□□□□ -0.63
RUNX3-203ENST00000399916 M0R381 172 aa11.14□□□□□ -0.63
RUNX3-203ENST00000399916 MRPL35Q9NZE8 188 aaKnown RBP11.14□□□□□ -0.63
RUNX3-203ENST00000399916 PROCRQ9UNN8 238 aa11.14□□□□□ -0.63
RUNX3-203ENST00000399916 CRXO43186 299 aaPredicted RBP11.13□□□□□ -0.63
RUNX3-203ENST00000399916 DLX6P56179 175 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 CALYQ9NYX4 217 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 LGALS9BQ3B8N2 356 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 LGALS9CQ6DKI2 356 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 CXXC4Q9H2H0 198 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 XGP55808 180 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 ZNF295-AS1Q8N0V1 137 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 C15orf61A6NNL5 157 aa11.13□□□□□ -0.63
RUNX3-203ENST00000399916 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
RUNX3-203ENST00000399916 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 FAM106CPP0CH98 169 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 COX6A1P12074 109 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 FAM106AQ4KMX7 169 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 ZNF329Q86UD4 541 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 SLC25A20O43772 301 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 M0R1B8 84 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 NDUFS7O75251 213 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 COX7A1P24310 79 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 CD69Q07108 199 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 JPT1Q9UK76 154 aa11.12□□□□□ -0.63
RUNX3-203ENST00000399916 GAGE2AQ6NT46 116 aa11.11□□□□□ -0.63
RUNX3-203ENST00000399916 VPS13AQ96RL7 3174 aa11.11□□□□□ -0.63
RUNX3-203ENST00000399916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.11□□□□□ -0.63
RUNX3-203ENST00000399916 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
RUNX3-203ENST00000399916 CCL13Q99616 98 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms