RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
SCAF4-202ENST00000399804 HIST1H2BLQ99880 126 aa11.15□□□□□ -0.62
SCAF4-202ENST00000399804 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
SCAF4-202ENST00000399804 SRD5A1P18405 259 aa11.15□□□□□ -0.63
SCAF4-202ENST00000399804 ZNF114Q8NC26 417 aa11.15□□□□□ -0.63
SCAF4-202ENST00000399804 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 TCAPO15273 167 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 C11orf44Q8N8P7 122 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 IGKV1OR2-108A0A075B7D4 117 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 TRBV7-1A0A0A6YYK4 115 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 GATA3P23771 443 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 SNRPD3P62318 126 aaKnown RBP11.14□□□□□ -0.63
SCAF4-202ENST00000399804 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 NPIPB5A8MRT5 1133 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 GZMBP10144 247 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 ADMP35318 185 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 YPEL3P61236 119 aaPredicted RBP11.14□□□□□ -0.63
SCAF4-202ENST00000399804 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 ASCL2Q99929 193 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 PRDM13Q9H4Q3 707 aa11.14□□□□□ -0.63
SCAF4-202ENST00000399804 PRSS1P07477 247 aa11.13□□□□□ -0.63
SCAF4-202ENST00000399804 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
SCAF4-202ENST00000399804 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
SCAF4-202ENST00000399804 LY96Q9Y6Y9 160 aa11.13□□□□□ -0.63
SCAF4-202ENST00000399804 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
SCAF4-202ENST00000399804 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
SCAF4-202ENST00000399804 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
SCAF4-202ENST00000399804 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
SCAF4-202ENST00000399804 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
SCAF4-202ENST00000399804 MAP1LC3CQ9BXW4 147 aa11.12□□□□□ -0.63
SCAF4-202ENST00000399804 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
SCAF4-202ENST00000399804 CENPVL3A0A0U1RRI6 287 aa11.12□□□□□ -0.63
SCAF4-202ENST00000399804 Q8TAT8 98 aa11.12□□□□□ -0.63
SCAF4-202ENST00000399804 C10orf105Q8TEF2 133 aa11.12□□□□□ -0.63
SCAF4-202ENST00000399804 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 TMEM136Q6ZRR5 245 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 Q96MF0 132 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
SCAF4-202ENST00000399804 A0A1W2PRX2 142 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 C11orf42Q8N5U0 333 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 TMEM191AQ9H0A3 160 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 BEX4Q9NWD9 120 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-202ENST00000399804 ABCA12Q86UK0 2595 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 SERF1AO75920 110 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 KMT2EQ8IZD2 1858 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 PPIFP30405 207 aaKnown RBP11.11□□□□□ -0.63
SCAF4-202ENST00000399804 TMEM249Q2WGJ8 235 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
SCAF4-202ENST00000399804 LEPROTL1O95214 131 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 IGHV4-38-2P0DP08 117 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 HNRNPA3P51991 378 aaKnown RBP11.1□□□□□ -0.63
SCAF4-202ENST00000399804 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 FBLL1A6NHQ2 334 aaKnown RBP11.1□□□□□ -0.63
SCAF4-202ENST00000399804 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 ZNF491Q8N8L2 437 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 FXYD5Q96DB9 178 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 HSPB8Q9UJY1 196 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 IGHV7-81A0A0B4J1V7 117 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 LMO4P61968 165 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 LCN12Q6JVE5 192 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 LYPD1Q8N2G4 141 aa11.1□□□□□ -0.63
SCAF4-202ENST00000399804 M0R381 172 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 IGKV1-17P01599 117 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 AMBPP02760 352 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 FAM159AQ6UWV7 190 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 NPBQ8NG41 125 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 SOX21Q9Y651 276 aaPredicted RBP11.09□□□□□ -0.63
SCAF4-202ENST00000399804 K7EIM0 57 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 CD33P20138 364 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
SCAF4-202ENST00000399804 TRBV19A0A075B6N1 114 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 LCNL1Q6ZST4 164 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 FRYLO94915 3013 aa11.09□□□□□ -0.63
SCAF4-202ENST00000399804 TEX22C9J3V5 150 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 OVOL3O00110 214 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 Q6AWC8 147 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 PATE2Q6UY27 113 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 TANC2Q9HCD6 1990 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 J3QKU1 62 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 ZNF664Q8N3J9 261 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 C11orf52Q96A22 123 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 I3L2K1 104 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 PSG3Q16557 428 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 C11orf71Q6IPW1 123 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
SCAF4-202ENST00000399804 IGHV3OR16-12A0A075B7B8 117 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 C21orf62-AS1Q17RA5 79 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 ASPHD1Q5U4P2 390 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 Q8N9W7 124 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 ZNF25P17030 456 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms