RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 A0A0G2JRQ6 117 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 FCN3O75636 299 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 WIPF2Q8TF74 440 aaPredicted RBP6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 SELLP14151 372 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 PYY3Q5JQD4 70 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 C14orf178Q8N769 122 aaPredicted RBP6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 TANC1Q9C0D5 1861 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 C6orf226Q5I0X4 101 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 POLR3KQ9Y2Y1 108 aaPredicted RBP6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 TRBV25-1A0A075B6N4 114 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 A8MWP6 167 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 K7EM74 188 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 AMN1Q8IY45 258 aa6.74□□□□□ -1.33
SPTLC3-201ENST00000399002 A0A087X0K7 114 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 IGHV1-69DA0A0B4J2H0 117 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 IGHV1-69P01742 117 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 GAGE1Q13065 139 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 C18orf32Q8TCD1 76 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 E7EQL1 145 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 IGLV3-1P01715 115 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 CFHR2P36980 270 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 MGAMO43451 1857 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 COL8A2P25067 703 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 SAA4P35542 130 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 C17orf58Q2M2W7 97 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 MPV17L2Q567V2 206 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 KLHL30-AS1Q8NEE0 82 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 RMI2Q96E14 147 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 SPXQ9BT56 116 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 SOCS3O14543 225 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 KLF5Q13887 457 aaPredicted RBP6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 POU2AF1Q16633 256 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 ZC2HC1BQ5TFG8 222 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 LYPD2Q6UXB3 125 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 TMEM219Q86XT9 240 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 V9GYV3 84 aa6.73□□□□□ -1.33
SPTLC3-201ENST00000399002 IGLV1-44P01699 117 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 MSMBP08118 114 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 SRD5A1P18405 259 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 Q8TAT8 98 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 ADAMTSL5Q6ZMM2 481 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 SPAG8Q99932 426 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 MSRB2Q9Y3D2 182 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 FNDC1Q4ZHG4 1894 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 IGHV1OR15-1A0A075B7D0 117 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 IGKV1-6A0A0C4DH72 117 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 C5orf63A6NC05 138 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 H3BQ85 93 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 ARMS2P0C7Q2 107 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 COX8AP10176 69 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 CEACAM8P31997 349 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 ZNF134P52741 427 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 APOC4P55056 127 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 PRIMA1Q86XR5 153 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 TP53TG1Q9Y2A0 90 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 HLA-DRB4P13762 266 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 PAX9P55771 341 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 NDPQ00604 133 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 RBMY1FQ15415 496 aaKnown RBP6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 VWC2Q2TAL6 325 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 Q6ZRM9 215 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 HLA-DRB4X5D2U9 266 aa6.72□□□□□ -1.33
SPTLC3-201ENST00000399002 TRAV13-2A0A0B4J235 113 aa6.71□□□□□ -1.33
SPTLC3-201ENST00000399002 GNLYP22749 145 aa6.71□□□□□ -1.33
SPTLC3-201ENST00000399002 HIST1H4AP62805 103 aaKnown RBP6.71□□□□□ -1.33
SPTLC3-201ENST00000399002 K7EP34 96 aa6.71□□□□□ -1.33
SPTLC3-201ENST00000399002 C1orf122Q6ZSJ8 110 aa6.71□□□□□ -1.33
SPTLC3-201ENST00000399002 PPDPFLQ8WWR9 84 aa6.71□□□□□ -1.33
SPTLC3-201ENST00000399002 C8orf49Q96NF6 230 aa6.71□□□□□ -1.33
SPTLC3-201ENST00000399002 C15orf65H3BRN8 121 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 LTAP01374 205 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 ZNF114Q8NC26 417 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 ATP6V0E1O15342 81 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 HERVK_113P63121 156 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 LCNL1Q6ZST4 164 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 DMRTC2Q8IXT2 367 aaPredicted RBP6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 KAAG1Q9UBP8 84 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 LENEPQ9Y5L5 61 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 PRB3Q04118 309 aaPredicted RBP6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 RHOHQ15669 191 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 RNF152Q8N8N0 203 aa6.71□□□□□ -1.34
SPTLC3-201ENST00000399002 IGHV3-73A0A0B4J1V6 119 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 CEND1Q8N111 149 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 K7ENP7 123 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 IGKV1-16P04430 117 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 MRPL51Q4U2R6 128 aaKnown RBP6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 C2orf66Q6UXQ4 117 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 UNQ6494/PRO21346Q6UXR6 183 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 MESP1Q9BRJ9 268 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 C8orf86Q6ZUL3 223 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 C1orf147Q96MC9 270 aaPredicted RBP6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 TRAV8-3A0A0A6YYJ7 113 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 SPINK8P0C7L1 97 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms